RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 MTF1Q14872 753 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.33
SSR1-205ENST00000475213 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 ACOT1Q86TX2 421 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 ADSSL1Q8N142 457 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 NELL1Q92832 810 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 TNIP3Q96KP6 325 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 MED10Q9BTT4 135 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.33
SSR1-205ENST00000475213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.337e-8■■□□□ 12.2
SSR1-205ENST00000475213 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.33
SSR1-205ENST00000475213 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 EHD2Q9NZN4 543 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 MYOFQ9NZM1 2061 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 GPR179Q6PRD1 2367 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
SSR1-205ENST00000475213 TDGF1P13385 188 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 TCF3P15923 654 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PFKLP17858 780 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PRCPP42785 496 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PPP3CCP48454 512 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PDE6CP51160 858 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 CCR3P51677 355 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 NDST1P52848 882 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 MCCD1P59942 119 aaPredicted RBP13.01□□□□□ -0.33
SSR1-205ENST00000475213 IFRD2Q12894 506 aaPredicted RBP13.01□□□□□ -0.33
SSR1-205ENST00000475213 TAF10Q12962 218 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ORC1Q13415 861 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 CCINQ13939 588 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
SSR1-205ENST00000475213 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 NUP93Q8N1F7 819 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ZBTB44Q8NCP5 570 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
SSR1-205ENST00000475213 CHFRQ96EP1 664 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 MMRN2Q9H8L6 949 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ZSCAN32Q9NX65 697 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PCDHGA2Q9Y5H1 932 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 ATP8B3O60423 1300 aa13.01□□□□□ -0.33
SSR1-205ENST00000475213 MYO16Q9Y6X6 1858 aa13□□□□□ -0.33
SSR1-205ENST00000475213 RTN3O95197 1032 aaPredicted RBP13□□□□□ -0.33
SSR1-205ENST00000475213 SMC2O95347 1197 aa13□□□□□ -0.33
SSR1-205ENST00000475213 CCDC130P13994 396 aa13□□□□□ -0.33
SSR1-205ENST00000475213 YWHAQP27348 245 aa13□□□□□ -0.33
SSR1-205ENST00000475213 ZXDBP98169 803 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SATB1Q01826 763 aa13□□□□□ -0.33
SSR1-205ENST00000475213 COBLL1Q53SF7 1204 aa13□□□□□ -0.33
SSR1-205ENST00000475213 Q6ZS52 159 aa13□□□□□ -0.33
SSR1-205ENST00000475213 UNC93AQ86WB7 457 aa13□□□□□ -0.33
SSR1-205ENST00000475213 FUKQ8N0W3 1084 aa13□□□□□ -0.33
SSR1-205ENST00000475213 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SPEM1Q8N4L4 309 aa13□□□□□ -0.33
SSR1-205ENST00000475213 C12orf29Q8N999 325 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SCAMP5Q8TAC9 235 aa13□□□□□ -0.33
SSR1-205ENST00000475213 ATRIPQ8WXE1 791 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SMARCE1Q969G3 411 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SMARCD1Q96GM5 515 aa13□□□□□ -0.33
SSR1-205ENST00000475213 TIGD1Q96MW7 591 aa13□□□□□ -0.33
SSR1-205ENST00000475213 SLITRK1Q96PX8 696 aa13□□□□□ -0.33
SSR1-205ENST00000475213 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
SSR1-205ENST00000475213 RNF38Q9H0F5 515 aa13□□□□□ -0.33
SSR1-205ENST00000475213 ECT2Q9H8V3 914 aa13□□□□□ -0.33
SSR1-205ENST00000475213 TMEM8AQ9HCN3 771 aa13□□□□□ -0.33
SSR1-205ENST00000475213 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
SSR1-205ENST00000475213 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
SSR1-205ENST00000475213 WNT6Q9Y6F9 365 aa13□□□□□ -0.33
SSR1-205ENST00000475213 TRDMT1O14717 391 aaKnown RBP12.99□□□□□ -0.33
SSR1-205ENST00000475213 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 CETN3O15182 167 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 LILRB5O75023 590 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 AP1G2O75843 785 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 OLFM2O95897 454 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 ABL1P00519 1130 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 OAS1P00973 400 aaKnown RBP12.99□□□□□ -0.33
SSR1-205ENST00000475213 EPB41P11171 864 aaKnown RBP12.99□□□□□ -0.33
SSR1-205ENST00000475213 GTF2H1P32780 548 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 CXCL12P48061 93 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 IFNAR2P48551 515 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 SLC5A3P53794 718 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 SLC7A9P82251 487 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 INCA1Q0VD86 236 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 EML3Q32P44 896 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 TMEM196Q5HYL7 178 aa12.99□□□□□ -0.33
SSR1-205ENST00000475213 KRT39Q6A163 491 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms