RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 CUEDC2Q9H467 287 aa26.54■■□□□ 1.84
TMEM54-205ENST00000475208 FOXD4L1Q9NU39 408 aa26.54■■□□□ 1.84
TMEM54-205ENST00000475208 USP24Q9UPU5 2620 aa26.54■■□□□ 1.84
TMEM54-205ENST00000475208 SCAMP3O14828 347 aaKnown RBP26.53■■□□□ 1.84
TMEM54-205ENST00000475208 TGFB1I1O43294 461 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 OAS1P00973 400 aaKnown RBP26.53■■□□□ 1.84
TMEM54-205ENST00000475208 PTPN1P18031 435 aaKnown RBP26.53■■□□□ 1.84
TMEM54-205ENST00000475208 CYP2J2P51589 502 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 CYP24A1Q07973 514 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 TAF10Q12962 218 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 TDRD10Q5VZ19 366 aaKnown RBP26.53■■□□□ 1.84
TMEM54-205ENST00000475208 KIAA1958Q8N8K9 716 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 INTS4Q96HW7 963 aaKnown RBP26.53■■□□□ 1.84
TMEM54-205ENST00000475208 ZNF518BQ9C0D4 1074 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 ELOVL4Q9GZR5 314 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 DPEP3Q9H4B8 488 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 TMEM30AQ9NV96 361 aa26.53■■□□□ 1.84
TMEM54-205ENST00000475208 CLIC2O15247 247 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 STX6O43752 255 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 BCKDHBP21953 392 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 SHC2P98077 582 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 AMPD3Q01432 767 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 IFRD2Q12894 506 aaPredicted RBP26.52■■□□□ 1.84
TMEM54-205ENST00000475208 DHCR24Q15392 516 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 WDR72Q3MJ13 1102 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 NELFCDQ8IXH7 590 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 ADGRG2Q8IZP9 1017 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 MDGA1Q8NFP4 955 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 SLITRK1Q96PX8 696 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 CFAP97Q9P2B7 532 aa26.52■■□□□ 1.84
TMEM54-205ENST00000475208 UBE4BO95155 1302 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 LNP1A1A4G5 178 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 SLC9A3R1O14745 358 aaPredicted RBP26.51■■□□□ 1.83
TMEM54-205ENST00000475208 SPTLC2O15270 562 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 FAM163BP0C2L3 166 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 MRPS21P82921 87 aaKnown RBP26.51■■□□□ 1.83
TMEM54-205ENST00000475208 CRY1Q16526 586 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 PSAPL1Q6NUJ1 521 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 TTC30AQ86WT1 665 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 SFTPA1Q8IWL2 248 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 XXYLT1Q8NBI6 393 aa26.51■■□□□ 1.83
TMEM54-205ENST00000475208 ABCA7Q8IZY2 2146 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 C4orf47A7E2U8 309 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 A8MXQ7 604 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 CLDN5O00501 218 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 MBL2P11226 248 aaPredicted RBP26.5■■□□□ 1.83
TMEM54-205ENST00000475208 SLC6A11P48066 632 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 CNNM4Q6P4Q7 775 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 CYP2U1Q7Z449 544 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 B3GALNT2Q8NCR0 500 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 SCFD1Q8WVM8 642 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 B3GNT5Q9BYG0 378 aa26.5■■□□□ 1.83
TMEM54-205ENST00000475208 NXF1Q9UBU9 619 aaKnown RBP26.5■■□□□ 1.83
TMEM54-205ENST00000475208 NUP205Q92621 2012 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 PPP6R2O75170 966 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 HNRNPLP14866 589 aaKnown RBP eCLIP26.49■■□□□ 1.83
TMEM54-205ENST00000475208 MYL6P60660 151 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 MESP2Q0VG99 397 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 TRPC3Q13507 836 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 TMEM92Q6UXU6 159 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 C12orf40Q86WS4 652 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 DDX42Q86XP3 938 aaKnown RBP eCLIP26.49■■□□□ 1.83
TMEM54-205ENST00000475208 ALLCQ8N6M5 410 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 IQUBQ8NA54 791 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 PNKPQ96T60 521 aa26.49■■□□□ 1.83
TMEM54-205ENST00000475208 GZF1Q9H116 711 aaPredicted RBP26.49■■□□□ 1.83
TMEM54-205ENST00000475208 ZFHX4Q86UP3 3567 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 THADAQ6YHU6 1953 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 KHNYNO15037 678 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 ALDH1A2O94788 518 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 KAT7O95251 611 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 KLF8O95600 359 aaPredicted RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 STAU1O95793 577 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 ADH1CP00326 375 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 APODP05090 189 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 YWHAQP27348 245 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 EIF2DP41214 584 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 NOVA1P51513 510 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 SNRPFP62306 86 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 RHBDF2Q6PJF5 856 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 UNC13DQ70J99 1090 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 NUP93Q8N1F7 819 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 TXNDC5Q8NBS9 432 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 ZNF516Q92618 1163 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 FBXO32Q969P5 355 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 C7orf25Q9BPX7 421 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 XYLT2Q9H1B5 865 aa26.48■■□□□ 1.83
TMEM54-205ENST00000475208 TFIP11Q9UBB9 837 aaKnown RBP26.48■■□□□ 1.83
TMEM54-205ENST00000475208 CHRM1P11229 460 aaPredicted RBP26.47■■□□□ 1.83
TMEM54-205ENST00000475208 ADH5P11766 374 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 TIE1P35590 1138 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 DHPSP49366 369 aaPredicted RBP26.47■■□□□ 1.83
TMEM54-205ENST00000475208 KDSRQ06136 332 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 EHHADHQ08426 723 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 DAB2IPQ5VWQ8 1189 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 SHC4Q6S5L8 630 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 IL17RCQ8NAC3 791 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 PDZD8Q8NEN9 1154 aa26.47■■□□□ 1.83
TMEM54-205ENST00000475208 SYAP1Q96A49 352 aaPredicted RBP26.47■■□□□ 1.83
TMEM54-205ENST00000475208 ARHGEF4Q9NR80 690 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms