RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TLL2Q9Y6L7 1015 aa4.3□□□□□ -1.72
USP16-205ENST00000474835 TRIM43BA6NCK2 446 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CLOCKO15516 846 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 UBL4AP11441 157 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ZFXP17010 805 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 CD247P20963 164 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ACO1P21399 889 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 PCMT1P22061 227 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PEX2P28328 305 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 MTIF2P46199 727 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 RASSF2P50749 326 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HSD17B4P51659 736 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CD300CQ08708 224 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ASPHQ12797 758 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 E2F2Q14209 437 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KCNJ11Q14654 390 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 NFIXQ14938 502 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 C16orf86Q6ZW13 317 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KRT25Q7Z3Z0 450 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CYP2U1Q7Z449 544 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 BPHLQ86WA6 291 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 VSIG1Q86XK7 387 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 DNAAF5Q86Y56 855 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 IFNL2Q8IZJ0 200 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 DAW1Q8N136 415 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ADCY4Q8NFM4 1077 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 USP6NLQ92738 828 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TXNDC15Q96J42 360 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HIC2Q96JB3 615 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SERAC1Q96JX3 654 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 COX4I2Q96KJ9 171 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 FNBP1Q96RU3 617 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PSMB7Q99436 277 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 DDX50Q9BQ39 737 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 HIPK3Q9H422 1215 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 CRNNQ9UBG3 495 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 GTF3C4Q9UKN8 822 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CCDC9Q9Y3X0 531 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 TCAF1Q9Y4C2 921 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 POTECB2RU33 542 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SORBS2O94875 1100 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 PABPC1P11940 636 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 GYS1P13807 737 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CCDC130P13994 396 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CXCR2P25025 360 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TM4SF1P30408 202 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 COPB2P35606 906 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 UBA7P41226 1012 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 NDST2P52849 883 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ITGA8P53708 1063 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 NR1H2P55055 460 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CDR2Q01850 454 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 FOLH1Q04609 750 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PSMD6Q15008 389 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 MORF4L2Q15014 288 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KNOP1Q1ED39 458 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TFAP2DQ7Z6R9 452 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ITIH5Q86UX2 942 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KIAA0825Q8IV33 1275 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CHPFQ8IZ52 775 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 RTKN2Q8IZC4 609 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TTC13Q8NBP0 860 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 DHX38Q92620 1227 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 ACDQ96AP0 544 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HSPBAP1Q96EW2 488 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ZNF512Q96ME7 567 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 OLFM1Q99784 485 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HSD17B14Q9BPX1 270 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 BCL7BQ9BQE9 202 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ANKRD2Q9GZV1 360 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 NLRP2Q9NX02 1062 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SCHIP1Q9P0W5 487 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 HDAC9Q9UKV0 1011 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ZNRF3Q9ULT6 936 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SNX24Q9Y343 169 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 TMEM114B3SHH9 223 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KLRF2D3W0D1 207 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 H3BMQ9 156 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KMOO15229 486 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SPTLC1O15269 473 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PSTPIP1O43586 416 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ATE1O95260 518 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 H2AFZP0C0S5 128 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 MYL4P12829 197 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ETS2P15036 469 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PLCG2P16885 1265 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ZFP36L2P47974 494 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 FASTKD3Q14CZ7 662 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 TMEM132AQ24JP5 1023 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 P3H1Q32P28 736 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 CCDC153Q494R4 210 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms