RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 APODP05090 189 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 MAPK8P45983 427 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 SLC6A11P48066 632 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 IRX4P78413 519 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 RESTQ13127 1097 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 GAB4Q2WGN9 574 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 TMEM92Q6UXU6 159 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 CCDC73Q6ZRK6 1079 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 DPH6Q7L8W6 267 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 CBWD2Q8IUF1 395 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 DEFB124Q8NES8 71 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 RNF38Q9H0F5 515 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 SNX25Q9H3E2 840 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 ZMIZ1Q9ULJ6 1067 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 SRPRBQ9Y5M8 271 aaKnown RBP14.93□□□□□ -0.02
CCDC78-209ENST00000474647 DMXL2Q8TDJ6 3036 aa14.93□□□□□ -0.02
CCDC78-209ENST00000474647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 ZNF840PA6NDX5 716 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 ZNF233A6NK53 670 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 CDX4O14627 284 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 CLSTN1O94985 981 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 TOP3BO95985 862 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 MBL2P11226 248 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 HNRNPLP14866 589 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 PFKLP17858 780 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 WARSP23381 471 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 SLC7A9P82251 487 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 MRPS21P82921 87 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 DHCR24Q15392 516 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 SURF1Q15526 300 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 DUOXA2Q1HG44 320 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 TRIM61Q5EBN2 209 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 KIAA1211LQ6NV74 962 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 FAM173BQ6P4H8 233 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 LPCAT2Q7L5N7 544 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 C12orf40Q86WS4 652 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 TMEFF1Q8IYR6 380 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 IL17RCQ8NAC3 791 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 MYCBPAPQ8TBZ2 947 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 WHAMMQ8TF30 809 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 HMGB4Q8WW32 186 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 SLITRK1Q96PX8 696 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 PNKPQ96T60 521 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 MRPL45Q9BRJ2 306 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 TTLL2Q9BWV7 592 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 NUSAP1Q9BXS6 441 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 ADAM33Q9BZ11 813 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 POLMQ9NP87 494 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 CFAP97Q9P2B7 532 aa14.92□□□□□ -0.02
CCDC78-209ENST00000474647 DSPP15924 2871 aaKnown RBP14.92□□□□□ -0.02
CCDC78-209ENST00000474647 A0A087X0B3 334 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 FRMD3A2A2Y4 597 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 SGK1O00141 431 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 SLC9A3R1O14745 358 aaPredicted RBP14.91□□□□□ -0.02
CCDC78-209ENST00000474647 KIAA0391O15091 583 aaKnown RBP14.91□□□□□ -0.02
CCDC78-209ENST00000474647 KAT7O95251 611 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 ADH1CP00326 375 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 DLATP10515 647 aaKnown RBP14.91□□□□□ -0.02
CCDC78-209ENST00000474647 ADH5P11766 374 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 CEACAM1P13688 526 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
CCDC78-209ENST00000474647 MESP2Q0VG99 397 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 TAF10Q12962 218 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 TDRD10Q5VZ19 366 aaKnown RBP14.91□□□□□ -0.02
CCDC78-209ENST00000474647 STXBP4Q6ZWJ1 553 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 WDR49Q8IV35 697 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 CCDC65Q8IXS2 484 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 PDILTQ8N807 584 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 FRMD1Q8N878 549 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 OR6B3Q8NGW1 331 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 HPS3Q969F9 1004 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 CEP295NLQ96MC4 621 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 DPEP3Q9H4B8 488 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 ARHGEF4Q9NR80 690 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 HSPBP1Q9NZL4 362 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 BAHCC1Q9P281 2608 aa14.91□□□□□ -0.02
CCDC78-209ENST00000474647 TCRBV21S2A2A0A5A6 115 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 OAS1P00973 400 aaKnown RBP14.9□□□□□ -0.02
CCDC78-209ENST00000474647 TNNI1P19237 187 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 CSRP1P21291 193 aaKnown RBP14.9□□□□□ -0.02
CCDC78-209ENST00000474647 GNL1P36915 607 aaPredicted RBP14.9□□□□□ -0.02
CCDC78-209ENST00000474647 P2RY2P41231 377 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 PTGER3P43115 390 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 PPP3CCP48454 512 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 CACNA2D1P54289 1103 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 TNNC1P63316 161 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 LMAN2Q12907 356 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 EOGTQ5NDL2 527 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 EMC10Q5UCC4 262 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 LIMS2Q7Z4I7 341 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 ADGRG2Q8IZP9 1017 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 RDH13Q8NBN7 331 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 OLIG1Q8TAK6 271 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 C8orf48Q96LL4 319 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 SCNM1Q9BWG6 230 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
CCDC78-209ENST00000474647 ELOVL4Q9GZR5 314 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms