RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 BCAS4Q8TDM0 211 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 EPS8L3Q8TE67 593 aaKnown RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 TRIB2Q92519 343 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 CENPIQ92674 756 aaPredicted RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 FAF2Q96CS3 445 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 DDX23Q9BUQ8 820 aaKnown RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 DNAI2Q9GZS0 605 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 STMN4Q9H169 189 aaPredicted RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 EPN3Q9H201 632 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 DPEP3Q9H4B8 488 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 FAM49BQ9NUQ9 324 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 LGALS13Q9UHV8 139 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
USP39-214ENST00000474572 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
USP39-214ENST00000474572 C5orf60A6NFR6 353 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 GABRDO14764 452 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 RASGRF2O14827 1237 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 XPO1O14980 1071 aaKnown RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 RGS16O15492 202 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 TRAPPC3O43617 180 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 ZSCAN5DPP0CG00 497 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 HPDP32754 393 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 VPS41P49754 854 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 RGS7P49802 495 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 FCGRTP55899 365 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 TFDP2Q14188 446 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 DPYSL3Q14195 570 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 TAF5Q15542 800 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 C15orf59Q2T9L4 293 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 BOLA3Q53S33 107 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 FAM47CQ5HY64 1035 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 KCNT1Q5JUK3 1230 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 MFSD14CQ5VZR4 134 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 SLC9A4Q6AI14 798 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 GDF6Q6KF10 455 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 GSTA5Q7RTV2 222 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 MRPL10Q7Z7H8 261 aaKnown RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 PCGF5Q86SE9 256 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 PRUNE1Q86TP1 453 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 SERINC5Q86VE9 423 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 CCDC25Q86WR0 208 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 ADGRF2Q8IZF7 708 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 RIBC1Q8N443 379 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 PRCCQ92733 491 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 RNF157Q96PX1 679 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 HNRNPABQ99729 332 aaKnown RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 ZNF670Q9BS34 389 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 APOL6Q9BWW8 343 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 SENP6Q9GZR1 1112 aaPredicted RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 CCDC134Q9H6E4 229 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 KLK14Q9P0G3 267 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 BCCIPQ9P287 314 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP39-214ENST00000474572 PCSK1NQ9UHG2 260 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 ATXN2Q99700 1313 aaKnown RBP10.27□□□□□ -0.77
USP39-214ENST00000474572 UTRNP46939 3433 aa10.27□□□□□ -0.77
USP39-214ENST00000474572 PATJQ8NI35 1801 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 E7ESA3 106 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 M0QZ92 97 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 SEPT4O43236 478 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 HCRTO43612 131 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 PRPSAP2O60256 369 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 C6orf222P0C671 652 aaPredicted RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 CCDC130P13994 396 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 ETS1P14921 441 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 PECAM1P16284 738 aaPredicted RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 TGM2P21980 687 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 IL4RP24394 825 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 LMO2P25791 158 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 TKTP29401 623 aaKnown RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 ATP5DP30049 168 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 SDC4P31431 198 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GNL1P36915 607 aaPredicted RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 MAGEA4P43358 317 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 CDR1P51861 262 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GDF10P55107 478 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 CDH6P55285 790 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 HDAC4P56524 1084 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 LILRA4P59901 499 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GPS1Q13098 491 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 STAT4Q14765 748 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 RASA2Q15283 850 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 DPYSL2Q16555 572 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 KYNUQ16719 465 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 RAB6CQ53S08 254 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 ZNF618Q5T7W0 954 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 STRADAQ7RTN6 431 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 BNIPLQ7Z465 357 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 TDRPQ86YL5 185 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 RFX6Q8HWS3 928 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 NAT8LQ8N9F0 302 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms