RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CPA6Q8N4T0 437 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 OR2C3Q8N628 320 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 FSIP1Q8NA03 581 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CCDC63Q8NA47 563 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SLC26A7Q8TE54 656 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ZNF764Q96H86 408 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 RIPOR3Q96MK2 946 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 TBCDQ9BTW9 1192 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 AP5M1Q9H0R1 490 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SUV39H2Q9H5I1 410 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 KLC4Q9NSK0 619 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ZBTB40Q9NUA8 1239 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 UCKL1Q9NWZ5 548 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ADPRHL2Q9NX46 363 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 IPO11Q9UI26 975 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 CHMP2BQ9UQN3 213 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 A0A087WV62 115 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 A0A0G2JS52 829 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 A0A1B0GTQ1 180 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CACNG3O60359 315 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PLA2G6O60733 806 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PRPF6O94906 941 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 HMGN1P05114 100 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GJB1P08034 283 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 MYZAPP0CAP1 466 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PCSK2P16519 638 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GALP22466 123 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GPC1P35052 558 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GNAI1P63096 354 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 XIAPP98170 497 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 TAP1Q03518 808 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 LGALS3BPQ08380 585 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SLFN5Q08AF3 891 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ZNF267Q14586 743 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 DLGAP5Q15398 846 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 MAPK6Q16659 721 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CFAP100Q494V2 611 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 THEM4Q5T1C6 240 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 LIN9Q5TKA1 542 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ALG1LQ6GMV1 187 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CENPPQ6IPU0 288 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 MTFR2Q6P444 385 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 NOTUMQ6P988 496 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PTCHD4Q6ZW05 846 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ANO5Q75V66 913 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 LIMS2Q7Z4I7 341 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 KBTBD6Q86V97 674 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CHD1LQ86WJ1 897 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 UNC45BQ8IWX7 931 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 FBXW8Q8N3Y1 598 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ATAD1Q8NBU5 361 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 KCTD6Q8NC69 237 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SPATA4Q8NEY3 305 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ZMIZ2Q8NF64 920 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CLHC1Q8NHS4 586 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 XAGE3Q8WTP9 111 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 WASF1Q92558 559 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SPACA9Q96E40 222 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 EAF1Q96JC9 268 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 NFKBIZQ9BYH8 718 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GRIP2Q9C0E4 1043 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ANKRD2Q9GZV1 360 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 EBF2Q9HAK2 575 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SP110Q9HB58 689 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CRTAC1Q9NQ79 661 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PIH1D3Q9NQM4 214 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 UXTQ9UBK9 157 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 ADD3Q9UEY8 706 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 STK38LQ9Y2H1 464 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 AP3M1Q9Y2T2 418 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CLDN16Q9Y5I7 305 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 NUMBLQ9Y6R0 609 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ARHGAP31Q2M1Z3 1444 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ATXN2Q99700 1313 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 A0A0A6YYJ9 748 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 A0A1W2PPW3 197 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 XKRY2A2RUG3 117 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SLCO1B7G3V0H7 640 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GCOM1H8Y6P7 765 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 SSX5O60225 188 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PRLP01236 227 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 DHRS4L1P0CG22 281 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ODC1P11926 461 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 NPR3P17342 541 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LAG3P18627 525 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 SDSP20132 328 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 MPSTP25325 297 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 ADRA1BP35368 520 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 PITPNBP48739 271 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 STARP49675 285 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CASP5P51878 434 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GBX2P52951 348 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 ATN1P54259 1190 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 SSRP1Q08945 709 aaKnown RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 MAP4K2Q12851 820 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 CHIT1Q13231 466 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 RAPSNQ13702 412 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GIT2Q14161 759 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 LPIN1Q14693 890 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 USP10Q14694 798 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms