RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 FAM114A2Q9NRY5 505 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 ASNSD1Q9NWL6 643 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 DDX56Q9NY93 547 aaKnown RBP18.89■□□□□ 0.61
VARS2-206ENST00000473916 SAE1Q9UBE0 346 aaPredicted RBP18.89■□□□□ 0.61
VARS2-206ENST00000473916 RASAL2Q9UJF2 1139 aa18.89■□□□□ 0.61
VARS2-206ENST00000473916 RNF8O76064 485 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 RPL34P49207 117 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 DYNLT1P63172 113 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 ADIGQ0VDE8 80 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 TFDP3Q5H9I0 405 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 CLEC20AQ6ZU45 233 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 PIK3R5Q8WYR1 880 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 CCDC114Q96M63 670 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 DUSP16Q9BY84 665 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 KRT82Q9NSB4 513 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 SYF2O95926 243 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 KDELR1P24390 212 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 NDUFV1P49821 464 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 ATXN1P54253 815 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 GYS2P54840 703 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 PLTPP55058 493 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 PPP1R7Q15435 360 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 HADHQ16836 314 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 TCTN1Q2MV58 587 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 EIF1ADQ8N9N8 165 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 FBXO25Q8TCJ0 367 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 FAM172AQ8WUF8 416 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 PCED1BQ96HM7 432 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 NGRNQ9NPE2 291 aaKnown RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
VARS2-206ENST00000473916 GPATCH2LQ9NWQ4 482 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 DNPEPQ9ULA0 475 aa18.88■□□□□ 0.61
VARS2-206ENST00000473916 ZNF638Q14966 1978 aaKnown RBP18.87■□□□□ 0.61
VARS2-206ENST00000473916 GOLGA6BA6NDN3 693 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 DNM1LO00429 736 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 XPO1O14980 1071 aaKnown RBP18.87■□□□□ 0.61
VARS2-206ENST00000473916 DDHD2O94830 711 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 KRT7P08729 469 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 NPR3P17342 541 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 MAP3K7CLP57077 242 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 MMRN1Q13201 1228 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 UAP1Q16222 522 aaPredicted RBP18.87■□□□□ 0.61
VARS2-206ENST00000473916 SLC24A5Q71RS6 500 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 CTU1Q7Z7A3 348 aaKnown RBP18.87■□□□□ 0.61
VARS2-206ENST00000473916 TMEM86AQ8N2M4 240 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 TMEM209Q96SK2 561 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
VARS2-206ENST00000473916 DPYSL4O14531 572 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SKIP12755 728 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SELPP16109 830 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 PCK1P35558 622 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 HSPA9P38646 679 aaKnown RBP18.86■□□□□ 0.61
VARS2-206ENST00000473916 LHX1P48742 406 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 VPS41P49754 854 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 CCNG2Q16589 344 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 GPRIN1Q7Z2K8 1008 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 MREGQ8N565 214 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 GLIS1Q8NBF1 620 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SLCO2A1Q92959 643 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 ZIM3Q96PE6 472 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.86■□□□□ 0.61
VARS2-206ENST00000473916 CALCOCO1Q9P1Z2 691 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 PTPRDP23468 1912 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 TP73O15350 636 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 LIASO43766 372 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 PQBP1O60828 265 aaKnown RBP18.86■□□□□ 0.61
VARS2-206ENST00000473916 TJP3O95049 919 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SDC4P31431 198 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 PTPN7P35236 360 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 ATN1P54259 1190 aaPredicted RBP18.86■□□□□ 0.61
VARS2-206ENST00000473916 COPS2P61201 443 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 ADCY1Q08828 1119 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 ACAP1Q15027 740 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SCYL2Q6P3W7 929 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SLC26A9Q7LBE3 791 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 FAM35AQ86V20 835 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 KCTD6Q8NC69 237 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 SMOQ99835 787 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 MAGEB5Q9BZ81 275 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 UBN1Q9NPG3 1134 aa18.86■□□□□ 0.61
VARS2-206ENST00000473916 ODC1P11926 461 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 CETN2P41208 172 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 HDAC4P56524 1084 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 ZC3H12AQ5D1E8 599 aaKnown RBP18.85■□□□□ 0.61
VARS2-206ENST00000473916 TMC3Q7Z5M5 1100 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 ZMIZ2Q8NF64 920 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 DBF4BQ8NFT6 615 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 CMASQ8NFW8 434 aaPredicted RBP18.85■□□□□ 0.61
VARS2-206ENST00000473916 RSPH1Q8WYR4 309 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 HSFY1Q96LI6 401 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 RUNDC3BQ96NL0 473 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 FMO2Q99518 471 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 CALN1Q9BXU9 219 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 RNF208Q9H0X6 261 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 TMLHEQ9NVH6 421 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms