RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TDP1Q9NUW8 608 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PRSS50Q9UI38 385 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 SERPINB13Q9UIV8 391 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 TUBD1Q9UJT1 453 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 MAGED2Q9UNF1 606 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 CORO2BQ9UQ03 480 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 TELO2Q9Y4R8 837 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ZZEF1O43149 2961 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 RPAP1Q9BWH6 1393 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 ZNF521Q96K83 1311 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MYBBP1AQ9BQG0 1328 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 TMEM8BA6NDV4 472 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 SRRM3A6NNA2 597 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 ENO4A6NNW6 628 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 FAM171A2A8MVW0 826 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 ACOT7O00154 380 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PDHXO00330 501 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 DNM1LO00429 736 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 NBNO60934 754 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TUSC2O75896 110 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PRLP01236 227 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 ALDH2P05091 517 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 C1SP09871 688 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KCNA5P22460 613 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 SERPINB3P29508 390 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MC4RP32245 332 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 HALP42357 657 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TNNT2P45379 298 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 MAPK10P53779 464 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MLLT6P55198 1093 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 GPSM2P81274 684 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PFKPQ01813 784 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MGAT5Q09328 741 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 LMOD3Q0VAK6 560 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TUBA3CQ13748 450 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TRIM25Q14258 630 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 FGL2Q14314 439 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CNN3Q15417 329 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 ELF2Q15723 593 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CR1LQ2VPA4 569 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KRTAP21-3Q3LHN1 58 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 WDR72Q3MJ13 1102 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TRIM60Q495X7 471 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PLEKHO1Q53GL0 409 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 FAM83BQ5T0W9 1011 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CD276Q5ZPR3 534 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 XRRA1Q6P2D8 792 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TUBA3EQ6PEY2 450 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TMED8Q6PL24 325 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 BTNL9Q6UXG8 535 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 TMC5Q6UXY8 1006 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 OVCH2Q7RTZ1 564 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KCNK18Q7Z418 384 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 DPP9Q86TI2 863 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MSL3Q8N5Y2 521 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 GLB1L3Q8NCI6 653 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 KLHDC4Q8TBB5 520 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KCNG4Q8TDN1 519 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 POF1BQ8WVV4 589 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 RIN2Q8WYP3 895 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 ZCCHC14Q8WYQ9 949 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 RUBCNQ92622 972 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KAT5Q92993 513 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 ZBED3Q96IU2 234 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 CLPTM1LQ96KA5 538 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 LRRC37BQ96QE4 947 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 EYA3Q99504 573 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PAGR1Q9BTK6 254 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 LSM14BQ9BX40 385 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 LRRC27Q9C0I9 530 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 GREM2Q9H772 168 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CERS4Q9HA82 394 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PRDM16Q9HAZ2 1276 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 ZNF287Q9HBT7 754 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 SARS2Q9NP81 518 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 GALNT8Q9NY28 637 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 DTLQ9NZJ0 730 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 KCMF1Q9P0J7 381 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 ARHGAP20Q9P2F6 1191 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 POLLQ9UGP5 575 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CROTQ9UKG9 612 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PNMA2Q9UL42 364 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 LIMCH1Q9UPQ0 1083 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 POLHQ9Y253 713 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 PCDHA13Q9Y5I0 950 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CFAP20Q9Y6A4 193 aaKnown RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 CDY2AQ9Y6F7 541 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 MORC2Q9Y6X9 1032 aaPredicted RBP2.74□□□□□ -1.97
CALD1-216ENST00000473714 PHIPQ8WWQ0 1821 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 CEMIPQ8WUJ3 1361 aa2.74□□□□□ -1.97
CALD1-216ENST00000473714 NBEAQ8NFP9 2946 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 ZNF804BA4D1E1 1349 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 C2CD3Q4AC94 2353 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 LOC400499M0QZD8 3231 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 FRYLO94915 3013 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 OTOGLQ3ZCN5 2332 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 EPOPA6NHQ4 379 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 EIF4E1BA6NMX2 242 aaKnown RBP2.73□□□□□ -1.97
CALD1-216ENST00000473714 A6NNZ2 444 aa2.73□□□□□ -1.97
CALD1-216ENST00000473714 KPNA5O15131 536 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms