RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 A0A0G2JPF8 293 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 ISM1B1AKI9 464 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 HNRNPCL3B7ZW38 293 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 H3BNC9 293 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 PIP5K1BO14986 540 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 HTRA2O43464 458 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 PROM1O43490 865 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 DLDP09622 509 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 HNRNPCL4P0DMR1 293 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CD9P21926 228 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CST5P28325 142 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 KCNC1P48547 511 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 HNMTP50135 292 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 PRKAA2P54646 552 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 HTD2P86397 168 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 MPP3Q13368 585 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTF1-203ENST00000473214 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 UGT8Q16880 541 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTF1-203ENST00000473214 SMU1Q2TAY7 513 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 BOLA3Q53S33 107 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 KRBOX4Q5JUW0 171 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 MBNL2Q5VZF2 373 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 ZNF574Q6ZN55 896 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 KCNK18Q7Z418 384 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CHST13Q8NET6 341 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CEP76Q8TAP6 659 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 DDX54Q8TDD1 881 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 NOC3LQ8WTT2 800 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 C17orf50Q8WW18 174 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 SEPT1Q8WYJ6 367 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 LRRC59Q96AG4 307 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 EAF2Q96CJ1 260 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 IQCDQ96DY2 449 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 TWNKQ96RR1 684 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 SPXQ9BT56 116 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 TTPALQ9BTX7 342 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 BOCQ9BWV1 1114 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 GP6Q9HCN6 339 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 DDX18Q9NVP1 670 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 CPNE7Q9UBL6 633 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 CPSF3Q9UKF6 684 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 GPR55Q9Y2T6 319 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 TMED5Q9Y3A6 229 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 FAM169AQ9Y6X4 670 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 DUOX2Q9NRD8 1548 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 UNC13BO14795 1591 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 LAMC1P11047 1609 aa6.39□□□□□ -1.39
RTF1-203ENST00000473214 COL22A1Q8NFW1 1626 aaPredicted RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 MARF1Q9Y4F3 1742 aaKnown RBP6.39□□□□□ -1.39
RTF1-203ENST00000473214 LACTBL1A8MY62 500 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 BIN1O00499 593 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 GSTA4O15217 222 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 EXOC3O60645 756 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 TPM3P06753 285 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ITGA5P08648 1049 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 CLEC2LP0C7M8 214 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 MTHFD2P13995 350 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 PTPN2P17706 415 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ARF4P18085 180 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 KELP23276 732 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 EDNRBP24530 442 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 AOAHP28039 575 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 BUD31P41223 144 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 ASPAP45381 313 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 AMPHP49418 695 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 AARSP49588 968 aaKnown RBP eCLIP6.38□□□□□ -1.39
RTF1-203ENST00000473214 CCT4P50991 539 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 SUMO3P55854 103 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 BCAR1P56945 870 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ACTR2P61160 394 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 ETF1P62495 437 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 GALNT2Q10471 571 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 RAB30Q15771 203 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 HSP90AA5PQ58FG0 334 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 TOR1AIP1Q5JTV8 583 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 WDR93Q6P2C0 686 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 BORAQ6PGQ7 559 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 RSPO2Q6UXX9 243 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 ATF7IPQ6VMQ6 1270 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 DENND5BQ6ZUT9 1274 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 OTOP1Q7RTM1 612 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 GPR149Q86SP6 731 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 METTL23Q86XA0 190 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 CCDC117Q8IWD4 279 aaPredicted RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 DIS3L2Q8IYB7 885 aaKnown RBP6.38□□□□□ -1.39
RTF1-203ENST00000473214 ADSSL1Q8N142 457 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 DPP10Q8N608 796 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 LINS1Q8NG48 757 aa6.38□□□□□ -1.39
RTF1-203ENST00000473214 FBXW5Q969U6 566 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms