RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RAB21Q9UL25 225 aa15.34■□□□□ 0.05
HIF3A-206ENST00000472815 CLDN5O00501 218 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 CHRNA3P32297 505 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 GJC1P36383 396 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 ALDH7A1P49419 539 aaKnown RBP15.33■□□□□ 0.04
HIF3A-206ENST00000472815 MAP3K7CLP57077 242 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 TAS2R40P59535 323 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 ADIGQ0VDE8 80 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 KIAA0319Q5VV43 1072 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 ZNF280DQ6N043 979 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 PAQR9Q6ZVX9 377 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 SPATA2LQ8IUW3 424 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-206ENST00000472815 RXFP2Q8WXD0 754 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 MYLPFQ96A32 169 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 RTP3Q9BQQ7 232 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 TRIM62Q9BVG3 475 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 DMAP1Q9NPF5 467 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-206ENST00000472815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.33■□□□□ 0.04
HIF3A-206ENST00000472815 STIM2Q9P246 746 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 LTBP2Q14767 1821 aa15.33■□□□□ 0.04
HIF3A-206ENST00000472815 LRCH4O75427 683 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 KRT1P04264 644 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 H2AFXP16104 143 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-206ENST00000472815 PTPN9P43378 593 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 CPNE8Q86YQ8 564 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 LRRC1Q9BTT6 524 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 HTATIP2Q9BUP3 242 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 CSNK1G1Q9HCP0 422 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 CNGB3Q9NQW8 809 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
HIF3A-206ENST00000472815 OR6C75A6NL08 312 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 H7C4K7 107 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FSCN2O14926 492 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 PRPSAP2O60256 369 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 B4GALT3O60512 393 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 PHF2O75151 1096 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 BAIAP3O94812 1187 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 UPP2O95045 317 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 MRPS5P82675 430 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 SMARCB1Q12824 385 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 DHX34Q14147 1143 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 TCTN1Q2MV58 587 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FAM171A1Q5VUB5 890 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 IFT20Q8IY31 132 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FUBP3Q96I24 572 aaKnown RBP eCLIP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FEZ2Q9UHY8 353 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 RASAL2Q9UJF2 1139 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 STAP1Q9ULZ2 295 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 USP18Q9UMW8 372 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 PTPRDP23468 1912 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 GRAP2O75791 330 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 TJP3O95049 919 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 GALTP07902 379 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 PTPN7P35236 360 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FLT3P36888 993 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 SLC11A1P49279 550 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 TKTL1P51854 596 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 YWHAZP63104 245 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 BOLA3Q53S33 107 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 VARS2Q5ST30 1063 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FUT10Q6P4F1 479 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 OR10T2Q8NGX3 314 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 HNRNPLLQ8WVV9 542 aaKnown RBP15.31■□□□□ 0.04
HIF3A-206ENST00000472815 FAM149B1Q96BN6 582 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 TBCBQ99426 244 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 PKMYT1Q99640 499 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 SMOQ99835 787 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 OSBPL8Q9BZF1 889 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 ZCWPW1Q9H0M4 648 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 EFR3BQ9Y2G0 817 aa15.31■□□□□ 0.04
HIF3A-206ENST00000472815 F8W810 466 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 DAB1O75553 588 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 DGKIO75912 1065 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
HIF3A-206ENST00000472815 BDNFP23560 247 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 MIPP30301 263 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 MATKP42679 507 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 GATMP50440 423 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 BCAR1P56945 870 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 CTXN3Q4LDR2 81 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 TFDP3Q5H9I0 405 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 RAB41Q5JT25 222 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 DAB2IPQ5VWQ8 1189 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
HIF3A-206ENST00000472815 ANKS3Q6ZW76 656 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 MAP7D3Q8IWC1 876 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 IRGQQ8WZA9 623 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 TOP1MTQ969P6 601 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
HIF3A-206ENST00000472815 SLITRK1Q96PX8 696 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 PNKPQ96T60 521 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 DDX47Q9H0S4 455 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms