RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 LIMS2Q7Z4I7 341 aa10□□□□□ -0.81
VCL-204ENST00000472585 C12orf40Q86WS4 652 aa10□□□□□ -0.81
VCL-204ENST00000472585 CEP76Q8TAP6 659 aa10□□□□□ -0.81
VCL-204ENST00000472585 ADAM32Q8TC27 787 aa10□□□□□ -0.81
VCL-204ENST00000472585 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
VCL-204ENST00000472585 ATP2A3Q93084 1043 aa10□□□□□ -0.81
VCL-204ENST00000472585 CDK5RAP3Q96JB5 506 aa10□□□□□ -0.81
VCL-204ENST00000472585 FGFBP2Q9BYJ0 223 aa10□□□□□ -0.81
VCL-204ENST00000472585 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
VCL-204ENST00000472585 TMEM30AQ9NV96 361 aa10□□□□□ -0.81
VCL-204ENST00000472585 BCCIPQ9P287 314 aaKnown RBP eCLIP10□□□□□ -0.81
VCL-204ENST00000472585 SLC6A14Q9UN76 642 aa10□□□□□ -0.81
VCL-204ENST00000472585 ATXN2Q99700 1313 aaKnown RBP10□□□□□ -0.81
VCL-204ENST00000472585 OBSL1O75147 1896 aa10□□□□□ -0.81
VCL-204ENST00000472585 TRAV19A0A0A6YYK7 116 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 SGK1O00141 431 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 ADAM23O75077 832 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 ITGB3P05106 788 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 TCF3P15923 654 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 HDCP19113 662 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 DDIT3P35638 169 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 CASP5P51878 434 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 TFAMQ00059 246 aaKnown RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 TSPY1Q01534 308 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 POU5F1Q01860 360 aaKnown RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 TRIP6Q15654 476 aaKnown RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 NFE2Q16621 373 aaPredicted RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 SV2CQ496J9 727 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 CFAP221Q4G0U5 840 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 RHBDF2Q6PJF5 856 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 RABEPKQ7Z6M1 372 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 SFR1Q86XK3 245 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 SCN4BQ8IWT1 228 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 PGBD3Q8N328 593 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 ALLCQ8N6M5 410 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 ZNF454Q8N9F8 522 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 IL17RCQ8NAC3 791 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 MDM1Q8TC05 714 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 SAAL1Q96ER3 474 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 TMEM206Q9H813 350 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 ABCB6Q9NP58 842 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 POLMQ9NP87 494 aaPredicted RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 CRTAC1Q9NQ79 661 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 GDAP2Q9NXN4 497 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 MMP17Q9ULZ9 603 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 ARHGAP26Q9UNA1 814 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 RAXQ9Y2V3 346 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 PTPRJQ12913 1337 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 GOLGA4Q13439 2230 aaKnown RBP9.99□□□□□ -0.81
VCL-204ENST00000472585 KALRNO60229 2985 aa9.99□□□□□ -0.81
VCL-204ENST00000472585 TCHHQ07283 1943 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 PLXND1Q9Y4D7 1925 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 PTPRBP23467 1997 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 A0A0A0MRY4 1105 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 GOLGA8IPA6NC78 632 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 GOLGA8JA6NMD2 632 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 LEFTY2O00292 366 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 CYP17A1P05093 508 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 CKMP06732 381 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 SYPP08247 313 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 SERPINF2P08697 491 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 SCP2P22307 547 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 HOXD12P35452 270 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 UBA7P41226 1012 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 P2RY2P41231 377 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 KIR2DL1P43626 348 aaPredicted RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 CACNA2D1P54289 1103 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 PSMC1P62191 440 aaKnown RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 RPL10AP62906 217 aaKnown RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 SPDYCQ5MJ68 293 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 SLFN12LQ6IEE8 588 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 CCNI2Q6ZMN8 369 aaPredicted RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 DYMQ7RTS9 669 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 PHTF2Q8N3S3 785 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 MINDY1Q8N5J2 469 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 CSGALNACT2Q8N6G5 542 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 TXNDC5Q8NBS9 432 aaKnown RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 ADAMTS14Q8WXS8 1223 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 POMGNT1Q8WZA1 660 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 WBP2Q969T9 261 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 AK8Q96MA6 479 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 FAM213AQ9BRX8 229 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 PDE11AQ9HCR9 933 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 TBC1D7Q9P0N9 293 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 UXTQ9UBK9 157 aaPredicted RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 PILRBQ9UKJ0 227 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
VCL-204ENST00000472585 SNX9Q9Y5X1 595 aa9.98□□□□□ -0.81
VCL-204ENST00000472585 MYH11P35749 1972 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 MYO18AQ92614 2054 aaKnown RBP9.97□□□□□ -0.81
VCL-204ENST00000472585 ZNF840PA6NDX5 716 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 MYMKA6NI61 221 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 AP5Z1O43299 807 aa9.97□□□□□ -0.81
VCL-204ENST00000472585 SLC26A4O43511 780 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms