RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MRGPRX1Q96LB2 322 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 C17orf80Q9BSJ5 609 aa4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 GBA2Q9HCG7 927 aaPredicted RBP4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
PRPF40A-207ENST00000471701 CACNA1IQ9P0X4 2223 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 TCRBV5S1A1TA0A578 114 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 E5RJQ4 531 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 INSIG1O15503 277 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 PMPCBO75439 489 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 RNF8O76064 485 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 VNN1O95497 513 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 NTN1O95631 604 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 FGAP02671 866 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 FPR3P25089 353 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 HTR1BP28222 390 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 TKTP29401 623 aaKnown RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 GKP32189 559 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 RAB32Q13637 225 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 CCNIQ14094 377 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF267Q14586 743 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 MLC1Q15049 377 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 CYP1B1Q16678 543 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 PTPROQ16827 1216 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 RNASE12Q5GAN4 147 aaKnown RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 SHC4Q6S5L8 630 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF517Q6ZMY9 492 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 DENND1CQ8IV53 801 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 C16orf71Q8IYS4 520 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 BPIFB1Q8TDL5 484 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 DIS3LQ8TF46 1054 aaKnown RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 TMEM171Q8WVE6 324 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 PRR25Q96S07 402 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 EFHD1Q9BUP0 239 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 PNMA8BQ9ULN7 279 aaPredicted RBP4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 AFG3L2Q9Y4W6 797 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 SNX14Q9Y5W7 946 aa4.27□□□□□ -1.73
PRPF40A-207ENST00000471701 A0A087WWL8 130 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 IGSF3O75054 1194 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 UBXN7O94888 489 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 MT-CO3P00414 261 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 KITP10721 976 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 SLC13A2Q13183 592 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 CERCAMQ5T4B2 595 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 DPY19L3Q6ZPD9 716 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 BCDIN3DQ7Z5W3 292 aaKnown RBP4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 NSMCE1Q8WV22 266 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
PRPF40A-207ENST00000471701 H3BML4 177 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 H3BNC9 293 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 RGS10O43665 173 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 SCP2P22307 547 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 MTHFSP49914 203 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 COPB1P53618 953 aaKnown RBP4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 TWIST1Q15672 202 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 INSCQ1MX18 579 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 PTCHD3Q3KNS1 767 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 TMEM65Q6PI78 240 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 PTCHD4Q6ZW05 846 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 OSR1Q8TAX0 266 aaPredicted RBP4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 LRGUKQ96M69 825 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 MMS19Q96T76 1030 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 TRIM54Q9BYV2 358 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 SLC12A5Q9H2X9 1139 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 SNX15Q9NRS6 342 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 MGAT4CQ9UBM8 478 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 MAFFQ9ULX9 164 aa4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 DRG1Q9Y295 367 aaKnown RBP4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 NOP58Q9Y2X3 529 aaKnown RBP4.25□□□□□ -1.73
PRPF40A-207ENST00000471701 E2F8A0AVK6 867 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 M0R3H8 397 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 ABLIM3O94929 683 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 CBSLP0DN79 551 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 CREB1P16220 341 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 EPHA3P29320 983 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 CBSP35520 551 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 ARFIP2P53365 341 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 BCAT1P54687 386 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 RBMS2Q15434 407 aaKnown RBP4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 IRF2BP2Q7Z5L9 587 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 ZDHHC17Q8IUH5 632 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 NGDNQ8NEJ9 315 aaKnown RBP4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 COQ8BQ96D53 544 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 SUCLG2Q96I99 432 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 PPP1R9BQ96SB3 815 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 EBF3Q9H4W6 596 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 NMRK2Q9NPI5 230 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 A1CFQ9NQ94 594 aaKnown RBP4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 XPNPEP3Q9NQH7 507 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 ZNF180Q9UJW8 692 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 PAXBP1Q9Y5B6 917 aa4.24□□□□□ -1.73
PRPF40A-207ENST00000471701 PHGDHO43175 533 aaKnown RBP4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 ALDH1L1O75891 902 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 RASAL1O95294 804 aa4.23□□□□□ -1.73
PRPF40A-207ENST00000471701 NPR1P16066 1061 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms