RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SYT12Q8IV01 421 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 CCDC26Q8TAB7 109 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 FNIP1Q8TF40 1166 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SETD7Q8WTS6 366 aaKnown RBP4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SDR42E1Q8WUS8 393 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 FGF11Q92914 225 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 BRF1Q92994 677 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 MKL1Q969V6 931 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 TMEM176AQ96HP8 235 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 CASD1Q96PB1 797 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 RMDN3Q96TC7 470 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SPATA25Q9BR10 227 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SEMA4CQ9C0C4 833 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 CSRNP2Q9H175 543 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.13□□□□□ -1.75
LRCH3-213ENST00000471667 HSPBP1Q9NZL4 362 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
LRCH3-213ENST00000471667 MRPS23Q9Y3D9 190 aaKnown RBP4.13□□□□□ -1.75
LRCH3-213ENST00000471667 PMF1-BGLAPU3KQ54 211 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 TSC2P49815 1807 aa4.13□□□□□ -1.75
LRCH3-213ENST00000471667 SH3BP5O60239 455 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 TSPY3P0CV98 308 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 TSPY8P0CW00 308 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 MYBP10242 640 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 MCCP23508 829 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 TACR1P25103 407 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 GLUD2P49448 558 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 DGKEP52429 567 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 SNAP25P60880 206 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 IGBP1P78318 339 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 PRR5P85299 388 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 AMPD2Q01433 879 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 TLE3Q04726 772 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 CCDC173Q0VFZ6 552 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 BYSLQ13895 437 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 MRPL58Q14197 206 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 KIZQ2M2Z5 673 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 TMEM266Q2M3C6 531 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ZXDCQ2QGD7 858 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 PABPC1LQ4VXU2 614 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ANKRD39Q53RE8 183 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 DCAF6Q58WW2 860 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 UBXN11Q5T124 520 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ZFYVE27Q5T4F4 411 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 NT5DC1Q5TFE4 455 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RCSD1Q6JBY9 416 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 Q6ZS52 159 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 LRRC55Q6ZSA7 311 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 KCTD1Q719H9 257 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RALGPS2Q86X27 583 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 MINDY1Q8N5J2 469 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ZNF248Q8NDW4 579 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RGS22Q8NE09 1264 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ZNF707Q96C28 371 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RPS6KC1Q96S38 1066 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RIOK1Q9BRS2 568 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 SPON2Q9BUD6 331 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RNF38Q9H0F5 515 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RANBP17Q9H2T7 1088 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 GP6Q9HCN6 339 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ZNF334Q9HCZ1 680 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 PIH1D3Q9NQM4 214 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 RBM12Q9NTZ6 932 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ERAP1Q9NZ08 941 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 ST3GAL5Q9UNP4 418 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 PA2G4Q9UQ80 394 aaKnown RBP4.12□□□□□ -1.75
LRCH3-213ENST00000471667 FAN1Q9Y2M0 1017 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 FHOD1Q9Y613 1164 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 FPGT-TNNI3KV9GXZ4 949 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 POLQO75417 2590 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 KDM3AQ9Y4C1 1321 aa4.12□□□□□ -1.75
LRCH3-213ENST00000471667 PCNX1Q96RV3 2341 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PLK4O00444 970 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TEX28O15482 410 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SUV39H1O43463 412 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 EXTL3O43909 919 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 ALDH1A2O94788 518 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SOD2P04179 222 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 ALDH2P05091 517 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SLC3A2P08195 630 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 HSPD1P10809 573 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 CDK4P11802 303 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 IMPDH2P12268 514 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 MYCLP12524 364 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PDIA4P13667 645 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 JUPP14923 745 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 IFNGR1P15260 489 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 UBA1P22314 1058 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 CORO7P57737 925 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 ADAM17P78536 824 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 FAM189BP81408 668 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TLE1Q04724 770 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 GRSF1Q12849 480 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 OS9Q13438 667 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SLC9C2Q5TAH2 1124 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 LYSMD4Q5XG99 296 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 GLB1LQ6UWU2 654 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms