RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CMTM8Q8IZV2 173 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 SHC3Q92529 594 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 FBXO32Q969P5 355 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 KXD1Q9BQD3 176 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 RPP25Q9BUL9 199 aaKnown RBP16.16■□□□□ 0.18
SDC3-203ENST00000471567 C1QTNF1Q9BXJ1 281 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 SLC2A4RGQ9NR83 387 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 HESX1Q9UBX0 185 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 TSPAN16Q9UKR8 245 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 ZNF840PA6NDX5 716 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 KRT5P13647 590 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 AVPR1AP37288 418 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 PDE6CP51160 858 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 APBA1Q02410 837 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 ARHGAP44Q17R89 818 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 GOLGA7BQ2TAP0 167 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 KLHDC7AQ5VTJ3 777 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 TTC30AQ86WT1 665 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 SCAMP5Q8TAC9 235 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 DEPDC1BQ8WUY9 529 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 TFAP2BQ92481 460 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 PLA2G2FQ9BZM2 168 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 PLCB1Q9NQ66 1216 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
SDC3-203ENST00000471567 DENND4CQ5VZ89 1909 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 TRAV19A0A0A6YYK7 116 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 DPYSL4O14531 572 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 SETSIPP0DME0 302 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 PSMC3P17980 439 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 VIPR2P41587 438 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 KIF11P52732 1056 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 BST2Q10589 180 aaKnown RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 ZNF268Q14587 947 aaPredicted RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 PKDCCQ504Y2 493 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 SNX30Q5VWJ9 437 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 APTXQ7Z2E3 356 aaKnown RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 MFSD6LQ8IWD5 586 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 CELF5Q8N6W0 485 aaKnown RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 ST13P5Q8NFI4 369 aaPredicted RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 LSM14BQ9BX40 385 aaKnown RBP16.14■□□□□ 0.17
SDC3-203ENST00000471567 KIF9Q9HAQ2 790 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.14■□□□□ 0.17
SDC3-203ENST00000471567 SCML2Q9UQR0 700 aa16.14■□□□□ 0.17
SDC3-203ENST00000471567 MYH10P35580 1976 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 HEPACAM2A8MVW5 462 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 XPO1O14980 1071 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 MED7O43513 233 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 NARSO43776 548 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 GPR37L1O60883 481 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 ZDHHC11BP0C7U3 371 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 ATP1A3P13637 1013 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 UCHL3P15374 230 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 HDCP19113 662 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 GPC5P78333 572 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 PFKPQ01813 784 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 PDE4CQ08493 712 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 MEA1Q16626 185 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 VITQ6UXI7 678 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 GPRIN1Q7Z2K8 1008 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 PIGZQ86VD9 579 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 ERGIC2Q96RQ1 377 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 TRMT61BQ9BVS5 477 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 NAA15Q9BXJ9 866 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 SMOC2Q9H3U7 446 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 TRPC7Q9HCX4 862 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 TDP1Q9NUW8 608 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 WNT16Q9UBV4 365 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 USP3Q9Y6I4 520 aa16.13■□□□□ 0.17
SDC3-203ENST00000471567 ZNF638Q14966 1978 aaKnown RBP16.13■□□□□ 0.17
SDC3-203ENST00000471567 OBSL1O75147 1896 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 C2orf78A6NCI8 922 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 TMEM221A6NGB7 291 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 M0R296 226 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 FOXN3O00409 490 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 PRAMEF12O95522 483 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 OLFM2O95897 454 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 USP8P40818 1118 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 PLA2G4AP47712 749 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 TUBP50607 506 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 TPM4P67936 248 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 UBXN1Q04323 297 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 FCHO2Q0JRZ9 810 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 CCDC186Q7Z3E2 898 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 BMP8AQ7Z5Y6 402 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 FAM71AQ8IYT1 594 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 ARL14EPQ8N8R7 260 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 UBA3Q8TBC4 463 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 KCTD13Q8WZ19 329 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms