RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SETSIPP0DME0 302 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 TFE3P19532 575 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 TNFAIP3P21580 790 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 RRM1P23921 792 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 CCR2P41597 374 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 RGS7P49802 495 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 BCAT1P54687 386 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 PITX1P78337 314 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 MAMLD1Q13495 774 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 SMC1AQ14683 1233 aaKnown RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 STILQ15468 1287 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 SYCE2Q6PIF2 218 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 VSTM1Q6UX27 236 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 TRIM72Q6ZMU5 477 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 MMS22LQ6ZRQ5 1243 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 FAM183BPQ6ZVS7 135 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 TMC7Q7Z402 723 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 DCP1BQ8IZD4 617 aaKnown RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 SPPL2BQ8TCT7 592 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 NT5C3BQ969T7 300 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 HSFY1Q96LI6 401 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 MYRFLQ96LU7 910 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 GUCD1Q96NT3 240 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 CLEC1BQ9P126 229 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 STK39Q9UEW8 545 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 YIPF1Q9Y548 306 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 PCDHB5Q9Y5E4 795 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 HCFC2Q9Y5Z7 792 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 NOTCH4Q99466 2003 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PLXNA3P51805 1871 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 TMEM191CA6NGB0 347 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 YJEFN3A6XGL0 299 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 BTNL10A8MVZ5 291 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 E7ENQ6 273 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PIK3R2O00459 728 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 RFPL2O75678 378 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 F11P03951 625 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 SLC5A3P53794 718 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 EPHA5P54756 1037 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 HADHBP55084 474 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ARPP19P56211 112 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 DAOAP59103 153 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ZXDBP98169 803 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 TSPY1Q01534 308 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 DLX2Q07687 328 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 NFE2Q16621 373 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 TDRD12Q587J7 1177 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 TCEAL5Q5H9L2 206 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 CCDC122Q5T0U0 273 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 CYP4A22Q5TCH4 519 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PHLDB2Q86SQ0 1253 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 SCUBE3Q8IX30 993 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 TMEM35BQ8NCS4 154 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 C2orf15Q8WU43 125 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 P2RY11Q96G91 374 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 SMARCD1Q96GM5 515 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 VCPIP1Q96JH7 1222 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PPP1R13BQ96KQ4 1090 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 CCDC42Q96M95 316 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 S1PR5Q9H228 398 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 OSGEPQ9NPF4 335 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 AVENQ9NQS1 362 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 CDH22Q9UJ99 828 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 INTUQ9ULD6 942 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 MAFFQ9ULX9 164 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 PPP2R2CQ9Y2T4 447 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
SF3A1-207ENST00000471342 INSL5Q9Y5Q6 135 aa10.43□□□□□ -0.74
SF3A1-207ENST00000471342 ANKRD62A6NC57 917 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 SLC38A8A6NNN8 435 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 TMCO5BA8MYB1 307 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 MED7O43513 233 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 GREM1O60565 184 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 ZMYND10O75800 440 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 POU2F2P09086 479 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 TMEM253P0C7T8 217 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 FAM200BP0CF97 657 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 RFC1P35251 1148 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 FLT3P36888 993 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 VAV2P52735 878 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 RPL7AP62424 266 aaKnown RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 ADAM15Q13444 863 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 ZNF268Q14587 947 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 MAPRE1Q15691 268 aaKnown RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
SF3A1-207ENST00000471342 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
SF3A1-207ENST00000471342 SNX30Q5VWJ9 437 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms