RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TPCN1Q9ULQ1 816 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 NOB1Q9ULX3 412 aaKnown RBP6.8□□□□□ -1.32
CCDC39-202ENST00000471307 TNIKQ9UKE5 1360 aa6.8□□□□□ -1.32
CCDC39-202ENST00000471307 ZNF804BA4D1E1 1349 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 ADORA2AP29274 412 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 CTGFP29279 349 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 CCNIQ14094 377 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SRSF7Q16629 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 DCAF12L1Q5VU92 463 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 C1QL2Q7Z5L3 287 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SRGAP1Q7Z6B7 1085 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 MICU3Q86XE3 530 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 RAB11FIP4Q86YS3 637 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SPARTQ8N0X7 666 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 VGLL2Q8N8G2 317 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 RAPGEF4Q8WZA2 1011 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 DDB2Q92466 427 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SMG7Q92540 1137 aaKnown RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 MAML1Q92585 1016 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 PPP1R9BQ96SB3 815 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 DPCDQ9BVM2 203 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 ZNF70Q9UC06 446 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SNX14Q9Y5W7 946 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 SNAPC4Q5SXM2 1469 aa6.79□□□□□ -1.32
CCDC39-202ENST00000471307 CFAP69A5D8W1 941 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 TRIM43BA6NCK2 446 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 GOLGA6CA6NDK9 693 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 GOLGA6BA6NDN3 693 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 TISP43B9A030 160 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 M0R3H8 397 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 HRGP04196 525 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 GOLGA6DP0CG33 693 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 MYBP10242 640 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 KLRC1P26715 233 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 BCAT1P54687 386 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 ARHGAP29Q52LW3 1261 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 APOA5Q6Q788 366 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 CYP2W1Q8TAV3 490 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 PPP2R3CQ969Q6 453 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 TRIM43Q96BQ3 446 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-202ENST00000471307 SNX18Q96RF0 628 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 GOLGA6AQ9NYA3 693 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
CCDC39-202ENST00000471307 CDY1Q9Y6F8 540 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 SYNJ2O15056 1496 aa6.78□□□□□ -1.32
CCDC39-202ENST00000471307 PRRT4C9JH25 899 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 PSMD9O00233 223 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 TUBB4AP04350 444 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 MYCLP12524 364 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-202ENST00000471307 SUMO3P55854 103 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-202ENST00000471307 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 MLC1Q15049 377 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 LRRC41Q15345 812 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 KIRREL2Q6UWL6 708 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 NAPRTQ6XQN6 538 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 NEK8Q86SG6 692 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 SLC29A3Q9BZD2 475 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 TRIM5Q9C035 493 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 ADAMTS12P58397 1594 aa6.77□□□□□ -1.33
CCDC39-202ENST00000471307 LOC102723971A0A1B0GUV8 181 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 TMEM233B4DJY2 109 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 PYCARD-AS1I3L0S3 204 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 SMIM22K7EJ46 135 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 ADAMTS3O15072 1205 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 TSPAN6O43657 245 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 BRAFP15056 766 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 EPHA3P29320 983 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 EPHB2P29323 1055 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 PRKAR1BP31321 381 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 POLD3Q15054 466 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 CNGA2Q16280 664 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 CYP1B1Q16678 543 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 TMEM63BQ5T3F8 832 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 SLC9A4Q6AI14 798 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 COL23A1Q86Y22 540 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 ANKRD13AQ8IZ07 590 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 SIRT6Q8N6T7 355 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 OR56A3Q8NH54 315 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 LENG8Q96PV6 779 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 C17orf80Q9BSJ5 609 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 LRRC27Q9C0I9 530 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 GBA2Q9HCG7 927 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 NRIP3Q9NQ35 241 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 STK32BQ9NY57 414 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 DNMT3BQ9UBC3 853 aaKnown RBP6.76□□□□□ -1.33
CCDC39-202ENST00000471307 USP19O94966 1318 aa6.76□□□□□ -1.33
CCDC39-202ENST00000471307 POC1B-GALNT4F8VUJ3 575 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 PPP6CO00743 305 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 PRR35P0CG20 571 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 NHLRC4P0CG21 123 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-202ENST00000471307 KELP23276 732 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 E2F1Q01094 437 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms