RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MBD3L3A6NE82 208 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 A6NNZ2 444 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PRRT4C9JH25 899 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 AP4M1O00189 453 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PPP6CO00743 305 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ADAMTS3O15072 1205 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 TBC1D4O60343 1298 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 EXOC3O60645 756 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CTNND1O60716 968 aaKnown RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 SRGAP2O75044 1071 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 S100BP04271 92 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PRKCBP05771 671 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 DLDP09622 509 aaKnown RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 U2AF1L5P0DN76 240 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CYP2D6P10635 497 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 BRAFP15056 766 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 KELP23276 732 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 KLRC1P26715 233 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CCKBRP32239 447 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ARHGAP25P42331 645 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 RENBPP51606 427 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PSG6Q00889 435 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 U2AF1Q01081 240 aaKnown RBP eCLIP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 LRRC41Q15345 812 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CNN3Q15417 329 aaKnown RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ETFDHQ16134 617 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 LY6KQ17RY6 165 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PTCHD3Q3KNS1 767 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CERKLQ49MI3 558 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 RNASE12Q5GAN4 147 aaKnown RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CEP78Q5JTW2 689 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 L1TD1Q5T7N2 865 aaKnown RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 FAM102BQ5T8I3 360 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 MORN5Q5VZ52 161 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 SLC2A7Q6PXP3 512 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 APOA5Q6Q788 366 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ZDHHC24Q6UX98 284 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 IZUMO1Q8IYV9 350 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 KIAA0319LQ8IZA0 1049 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 TERB1Q8NA31 727 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ABHD11Q8NFV4 315 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 OR56A3Q8NH54 315 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 DNAJB14Q8TBM8 379 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 TRIM43Q96BQ3 446 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 C5orf34Q96MH7 638 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ASB2Q96Q27 587 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 SNX18Q96RF0 628 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PPP1R9BQ96SB3 815 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 MMS19Q96T76 1030 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 C17orf80Q9BSJ5 609 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 DPCDQ9BVM2 203 aaPredicted RBP1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CIPCQ9C0C6 399 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF518BQ9C0D4 1074 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 TMEM60Q9H2L4 133 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 PDGFCQ9NRA1 345 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 ZSCAN32Q9NX65 697 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 STK32BQ9NY57 414 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 TBC1D30Q9Y2I9 924 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 CDY1Q9Y6F8 540 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 USP19O94966 1318 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SMIM35A0A1B0GVV1 85 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CFAP69A5D8W1 941 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 POC1B-GALNT4F8VUJ3 575 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 H7C4K7 107 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CD3EAPO15446 510 aaKnown RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 FRS3O43559 492 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 RRP9O43818 475 aaKnown RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MARCH6O60337 910 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 TUBB4AP04350 444 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CHRM5P08912 532 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CYP2A6P11509 494 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SFPQP23246 707 aaKnown RBP eCLIP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MTHFSP49914 203 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 ALDH5A1P51649 535 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 BCAT1P54687 386 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SUMO2P61956 95 aaKnown RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 RPS16P62249 146 aaKnown RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 HOXA4Q00056 320 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 PPP2R5AQ15172 486 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 NFE2Q16621 373 aaPredicted RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MINDY4Q4G0A6 757 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CACHD1Q5VU97 1274 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 RUSC1-AS1Q66K80 236 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 NXNQ6DKJ4 435 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF425Q6IV72 752 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SLC18B1Q6NT16 456 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MTHFD1LQ6UB35 978 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SERPINA13PQ6UXR4 307 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CATSPERGQ6ZRH7 1159 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 BCDIN3DQ7Z5W3 292 aaKnown RBP1.78□□□□□ -2.12
UBXN4-207ENST00000471246 KCTD20Q7Z5Y7 419 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MICU3Q86XE3 530 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CNGA4Q8IV77 575 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 TCEAL8Q8IYN2 117 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 CHPFQ8IZ52 775 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 SPARTQ8N0X7 666 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 GALNT16Q8N428 558 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 GALNT4Q8N4A0 578 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 MAGEB6Q8N7X4 407 aa1.78□□□□□ -2.12
UBXN4-207ENST00000471246 C8orf58Q8NAV2 365 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms