RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 WHAMMQ8TF30 809 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 FBXO32Q969P5 355 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 CYFIP2Q96F07 1278 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 SMOQ99835 787 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 SPATA6Q9NWH7 488 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-218ENST00000470942 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
HDAC6-218ENST00000470942 FAM200BP0CF97 657 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 FMO5P49326 533 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 SLC5A3P53794 718 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 MLLT6P55198 1093 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-218ENST00000470942 LRMPQ12912 555 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 MTF1Q14872 753 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 ITPRIPL2Q3MIP1 535 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 TRIM68Q6AZZ1 485 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 C1orf210Q8IVY1 113 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 PDZD8Q8NEN9 1154 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 MSANTD3Q96H12 275 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 FAXDC2Q96IV6 333 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
HDAC6-218ENST00000470942 HNRNPABQ99729 332 aaKnown RBP16.63■□□□□ 0.25
HDAC6-218ENST00000470942 FAM83CQ9BQN1 747 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 SRRTQ9BXP5 876 aaKnown RBP16.63■□□□□ 0.25
HDAC6-218ENST00000470942 EBF3Q9H4W6 596 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 CISHQ9NSE2 258 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 CHORDC1Q9UHD1 332 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-218ENST00000470942 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 CACNA1IQ9P0X4 2223 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 MYO16Q9Y6X6 1858 aa16.63■□□□□ 0.25
HDAC6-218ENST00000470942 PATJQ8NI35 1801 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 SPECC1L-ADORA2AF8WAN1 911 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 TNFRSF10BO14763 440 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 BEST1O76090 585 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 GNA14O95837 355 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 PFKLP17858 780 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 MAGEA9P43362 315 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 RUNX3Q13761 415 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 C1orf228Q6PIY5 440 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 RALGPS2Q86X27 583 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-218ENST00000470942 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 RIN3Q8TB24 985 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 CLDN23Q96B33 292 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 ARID3AQ99856 593 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 LMAN1LQ9HAT1 526 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 COMMD8Q9NX08 183 aa16.62■□□□□ 0.25
HDAC6-218ENST00000470942 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
HDAC6-218ENST00000470942 LAMTOR5O43504 91 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CTHP32929 405 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
HDAC6-218ENST00000470942 IFNAR2P48551 515 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 YWHAEP62258 255 aaKnown RBP16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CETN1Q12798 172 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 FZD5Q13467 585 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CUL2Q13617 745 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 PDGFRLQ15198 375 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 ZNF77Q15935 545 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 PPP1R26Q5T8A7 1209 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CLEC20AQ6ZU45 233 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 TMEM176AQ96HP8 235 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 RNF38Q9H0F5 515 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 CLSTN2Q9H4D0 955 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 HPS4Q9NQG7 708 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 ARHGAP26Q9UNA1 814 aa16.61■□□□□ 0.25
HDAC6-218ENST00000470942 LEFTY2O00292 366 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-218ENST00000470942 ARSAP15289 507 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 MRE11P49959 708 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 RAD23BP54727 409 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 SLC7A9P82251 487 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 USP4Q13107 963 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 PON2Q15165 354 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 TXNDC11Q6PKC3 985 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 SLC4A11Q8NBS3 891 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 FBXO44Q9H4M3 255 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 IL37Q9NZH6 218 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 GMIPQ9P107 970 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 CPQQ9Y646 472 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 WNT6Q9Y6F9 365 aa16.6■□□□□ 0.25
HDAC6-218ENST00000470942 OAS1P00973 400 aaKnown RBP16.59■□□□□ 0.25
HDAC6-218ENST00000470942 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
HDAC6-218ENST00000470942 TBXAS1P24557 533 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-218ENST00000470942 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-218ENST00000470942 KCNH2Q12809 1159 aa16.59■□□□□ 0.25
HDAC6-218ENST00000470942 LRRC32Q14392 662 aa16.59■□□□□ 0.25
HDAC6-218ENST00000470942 HECTD3Q5T447 861 aa16.59■□□□□ 0.25
HDAC6-218ENST00000470942 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
HDAC6-218ENST00000470942 ZNF687Q8N1G0 1237 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms