RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ATP1A4Q13733 1029 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 TAF5Q15542 800 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 TIGD6Q17RP2 521 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 VPS53Q5VIR6 699 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ERICH6BQ5W0A0 696 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 SULT6B1Q6IMI4 303 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ZNF585AQ6P3V2 769 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 CYP26C1Q6V0L0 522 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 FAM109AQ8N4B1 249 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 STT3BQ8TCJ2 826 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 OTUD7AQ8TE49 926 aaPredicted RBP4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ABHD5Q8WTS1 349 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 TMEM171Q8WVE6 324 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 FAM136AQ96C01 138 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 GRAMD1AQ96CP6 724 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 HIST1H2AAQ96QV6 131 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 BDH2Q9BUT1 245 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 AMBRA1Q9C0C7 1298 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ZNF768Q9H5H4 540 aaKnown RBP4.72□□□□□ -1.65
PRPF3-204ENST00000470824 PARPBPQ9NWS1 579 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 SAGE1Q9NXZ1 904 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ST6GALNAC2Q9UJ37 374 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 SSX2IPQ9Y2D8 614 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 HS3ST4Q9Y661 456 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 OR2W5A6NFC9 320 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 CDKL5O76039 1030 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 USP1O94782 785 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ARP10275 920 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 HGFP14210 728 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 DDX6P26196 483 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 UQCRC1P31930 480 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 BMPR1AP36894 532 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 PGDP52209 483 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 BEAN1Q3B7T3 259 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ATPAF1Q5TC12 328 aaPredicted RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ABLIM2Q6H8Q1 611 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 TTC30AQ86WT1 665 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 NRSN1Q8IZ57 195 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ABRAQ8N0Z2 381 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 TTC9BQ8N6N2 239 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 CPEB3Q8NE35 698 aaKnown RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 OSCP1Q8WVF1 389 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ATRIPQ8WXE1 791 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 ZBTB45Q96K62 511 aaPredicted RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 TBATAQ96M53 351 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 TPSD1Q9BZJ3 242 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 MAF1Q9H063 256 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 TP63Q9H3D4 680 aaPredicted RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 KIF17Q9P2E2 1029 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 PGAP2Q9UHJ9 254 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
PRPF3-204ENST00000470824 USP22Q9UPT9 525 aa4.71□□□□□ -1.66
PRPF3-204ENST00000470824 K7ESM1 405 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 MUSKO15146 869 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 DNPH1O43598 174 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 ACTL6BO94805 426 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 LAG3P18627 525 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 CD53P19397 219 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 HOXA5P20719 270 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 ADORA2AP29274 412 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 MTHFSP49914 203 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 TIAL1Q01085 375 aaKnown RBP eCLIP4.7□□□□□ -1.66
PRPF3-204ENST00000470824 PLP2Q04941 152 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 NFIXQ14938 502 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 RALBP1Q15311 655 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 TAF12Q16514 161 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 ADCK5Q3MIX3 580 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 DEPDC1Q5TB30 811 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 LIN54Q6MZP7 749 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 MMS22LQ6ZRQ5 1243 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 ZNF276Q8N554 614 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 MBD3L2Q8NHZ7 208 aaPredicted RBP4.7□□□□□ -1.66
PRPF3-204ENST00000470824 UBXN10Q96LJ8 280 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 NUDT22Q9BRQ3 303 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 RTKNQ9BST9 563 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 ACTRT3Q9BYD9 372 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 KLC2Q9H0B6 622 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 PABPC3Q9H361 631 aaKnown RBP4.7□□□□□ -1.66
PRPF3-204ENST00000470824 EPS8L2Q9H6S3 715 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 RRN3Q9NYV6 651 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 VPS51Q9UID3 782 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 LZTS1Q9Y250 596 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 TESMINQ9Y4I5 508 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 SNX14Q9Y5W7 946 aa4.7□□□□□ -1.66
PRPF3-204ENST00000470824 LRRFIP2Q9Y608 721 aaKnown RBP4.7□□□□□ -1.66
PRPF3-204ENST00000470824 A0A0G2JLL6 359 aaPredicted RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 PNMA6EA0A0J9YXQ4 647 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 HMX3A6NHT5 357 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 EIF3FO00303 357 aaPredicted RBP4.69□□□□□ -1.66
PRPF3-204ENST00000470824 PCDH17O14917 1159 aa4.69□□□□□ -1.66
PRPF3-204ENST00000470824 PPM1DO15297 605 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms