RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LRRC32Q14392 662 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 ZNF268Q14587 947 aaPredicted RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 NR1I3Q14994 352 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 PON2Q15165 354 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 MAN2A1Q16706 1144 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 DDR2Q16832 855 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 RSPO4Q2I0M5 234 aaPredicted RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 FILIP1LQ4L180 1135 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 SDHAF4Q5VUM1 108 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 GPR161Q8N6U8 529 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TMEM174Q8WUU8 243 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 MMRN2Q9H8L6 949 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 FBRSL1Q9HCM7 1045 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
HLA-C-206ENST00000470363 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
HLA-C-206ENST00000470363 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 NCOR2Q9Y618 2525 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 TRDMT1O14717 391 aaKnown RBP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 ATP2C2O75185 946 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 KRT13P13646 458 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 MAGEA11P43364 429 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 UBXN1Q04323 297 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 CYP24A1Q07973 514 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 RUNX3Q13761 415 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 LMBRD2Q68DH5 695 aaPredicted RBP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 FSTL4Q6MZW2 842 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 PKN3Q6P5Z2 889 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 DGLUCYQ7Z3D6 616 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 SLC22A12Q96S37 553 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 HINFPQ9BQA5 517 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 NDST4Q9H3R1 872 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 THG1LQ9NWX6 298 aaKnown RBP12.3□□□□□ -0.44
HLA-C-206ENST00000470363 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 NCDNQ9UBB6 729 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 NME7Q9Y5B8 376 aa12.3□□□□□ -0.44
HLA-C-206ENST00000470363 KIF26AQ9ULI4 1882 aaPredicted RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 CHURC1-FNTBB4DL54 471 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 MAPK13O15264 365 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 CBFA2T2O43439 604 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 TPM2P07951 284 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 CNR2P34972 360 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 FNTBP49356 437 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 VAMP7P51809 220 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 ZXDBP98169 803 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 MYL7Q01449 175 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 KCNH2Q12809 1159 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 BFSP1Q12934 665 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 SRSF5Q13243 272 aaKnown RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 TAF12Q16514 161 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 INTS8Q75QN2 995 aaKnown RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 LONP2Q86WA8 852 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 ADGRF2Q8IZF7 708 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
HLA-C-206ENST00000470363 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 MRFAP1L1Q96HT8 127 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 HPDLQ96IR7 371 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 GCNAQ96QF7 691 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 CYP2S1Q96SQ9 504 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 EBF3Q9H4W6 596 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 KIF9Q9HAQ2 790 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
HLA-C-206ENST00000470363 LAMA1P25391 3075 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 AFPP02771 609 aaKnown RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 RETP07949 1114 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 KRT19P08727 400 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 TMEM191BP0C7N4 346 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 DLATP10515 647 aaKnown RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 ARSAP15289 507 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 TCF3P15923 654 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
HLA-C-206ENST00000470363 PCSK1P29120 753 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 AVPR1AP37288 418 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 KLK7P49862 253 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 PPP3CAQ08209 521 aa12.28□□□□□ -0.44
HLA-C-206ENST00000470363 SURF1Q15526 300 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms