RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TRIM66O15016 1216 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 CTNNA2P26232 953 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 GLUD2P49448 558 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 CREMQ03060 361 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 PSMD5Q16401 504 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 WHAMMP3Q1A5X7 153 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 SIX6OS1Q8N1H7 587 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 UBL4BQ8N7F7 174 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 IRGQQ8WZA9 623 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL4A5-203ENST00000470339 PBKQ96KB5 322 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 BTBD6Q96KE9 485 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 B3GALT6Q96L58 329 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 C8orf48Q96LL4 319 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 CEP295NLQ96MC4 621 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 KCNK16Q96T55 309 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 PLVAPQ9BX97 442 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 GOLPH3Q9H4A6 298 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 METTL5Q9NRN9 209 aaKnown RBP15.9■□□□□ 0.14
COL4A5-203ENST00000470339 TMEM30AQ9NV96 361 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 HSFX1Q9UBD0 423 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 PCDHA3Q9Y5H8 950 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 GREB1Q4ZG55 1949 aa15.9■□□□□ 0.14
COL4A5-203ENST00000470339 PLXNA4Q9HCM2 1894 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 C2CD4BA6NLJ0 364 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 TMEM110-MUSTN1A8MSY1 372 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 DPYSL4O14531 572 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 NCK2O43639 380 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 SPOPO43791 374 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 OR4Q2P0C623 313 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 LCP1P13796 627 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 CYP2F1P24903 491 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 TKTL1P51854 596 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 ZNF143P52747 638 aaPredicted RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 CACNA2D1P54289 1103 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 MRPS5P82675 430 aaKnown RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 ADCY1Q08828 1119 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 ADIGQ0VDE8 80 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 LRRC38Q5VT99 294 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 TPGS2Q68CL5 300 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 PM20D1Q6GTS8 502 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 PRSS55Q6UWB4 352 aaPredicted RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 RSPO2Q6UXX9 243 aaPredicted RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 JOSD2Q8TAC2 188 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 CNPY3Q9BT09 278 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 ABI2Q9NYB9 513 aaPredicted RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 FNIP2Q9P278 1114 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 PCDH10Q9P2E7 1040 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 MAFFQ9ULX9 164 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
COL4A5-203ENST00000470339 ZNF638Q14966 1978 aaKnown RBP15.89■□□□□ 0.13
COL4A5-203ENST00000470339 PIK3R2O00459 728 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 DDX3YO15523 660 aaKnown RBP15.88■□□□□ 0.13
COL4A5-203ENST00000470339 HSF2BPO75031 334 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 FGF18O76093 207 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 GJB6O95452 261 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 URODP06132 367 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 CPB1P15086 417 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 DESP17661 470 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 GPD1P21695 349 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 PSMA2P25787 234 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
COL4A5-203ENST00000470339 BMPR1AP36894 532 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 GRIK1P39086 918 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 PEX5P50542 639 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 OGDHQ02218 1023 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 ZNF252P-AS1Q0IIN9 211 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 VPS52Q8N1B4 723 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 CLSTN3Q9BQT9 956 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 TRIM62Q9BVG3 475 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 RHOBTB2Q9BYZ6 727 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 CARD9Q9H257 536 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 COMMD8Q9NX08 183 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 PACSIN2Q9UNF0 486 aaPredicted RBP15.88■□□□□ 0.13
COL4A5-203ENST00000470339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL4A5-203ENST00000470339 CDY1Q9Y6F8 540 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 USP3Q9Y6I4 520 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 GBF1Q92538 1859 aa15.88■□□□□ 0.13
COL4A5-203ENST00000470339 PLXNA3P51805 1871 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 MTMR11A4FU01 709 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 F8VP50 259 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 TNFRSF10BO14763 440 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 PSTPIP1O43586 416 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 LILRB3O75022 631 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RNF8O76064 485 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 ABLIM3O94929 683 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 ZBED1O96006 694 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 CTSAP10619 480 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 PDGFRAP16234 1089 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 OR1D2P34982 312 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 MAGEA10P43363 369 aaPredicted RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 PTPN9P43378 593 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 DAOAP59103 153 aa15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RPL10AP62906 217 aaKnown RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 YWHAZP63104 245 aaKnown RBP15.87■□□□□ 0.13
COL4A5-203ENST00000470339 RAB33AQ14088 237 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms