RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TGM1P22735 817 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 NR2F2P24468 414 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 HOXC13P31276 330 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 ASPAP45381 313 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 IFNAR2P48551 515 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 FNTBP49356 437 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 MCCD1P59942 119 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-208ENST00000469802 ENPEPQ07075 957 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 TAF10Q12962 218 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 SGSM1Q2NKQ1 1148 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 CEP135Q66GS9 1140 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 ERMP1Q7Z2K6 904 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 LONP2Q86WA8 852 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 FUKQ8N0W3 1084 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 EZH1Q92800 747 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-208ENST00000469802 CCDC47Q96A33 483 aaKnown RBP17.33■□□□□ 0.36
COL9A3-208ENST00000469802 TNIP3Q96KP6 325 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 P2RY13Q9BPV8 354 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 RNF38Q9H0F5 515 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 IL37Q9NZH6 218 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 HMGXB4Q9UGU5 601 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 FRMD4BQ9Y2L6 1034 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 LEFTY2O00292 366 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 TNFRSF10BO14763 440 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 HRO43593 1189 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 AKAP3O75969 853 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 ZNF202O95125 648 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 DRD1P21728 446 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 CNR2P34972 360 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 FOXK2Q01167 660 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 LAIR1Q6GTX8 287 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 NUP93Q8N1F7 819 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 GPR161Q8N6U8 529 aaKnown RBP17.32■□□□□ 0.36
COL9A3-208ENST00000469802 OVCA2Q8WZ82 227 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 SMARCD1Q96GM5 515 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 SLITRK1Q96PX8 696 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 KCNK16Q96T55 309 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
COL9A3-208ENST00000469802 DMAP1Q9NPF5 467 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-208ENST00000469802 FAM92AA1XBS5 289 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 RNF40O75150 1001 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 RTN3O95197 1032 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-208ENST00000469802 HLA-DRAP01903 254 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 P4HA1P13674 534 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 PIK3CAP42336 1068 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 GALK1P51570 392 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 VAMP7P51809 220 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 INCA1Q0VD86 236 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 GAB4Q2WGN9 574 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 FBXO43Q4G163 708 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
COL9A3-208ENST00000469802 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 WDR5BQ86VZ2 330 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 CRYBG2Q8N1P7 616 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 PDZD8Q8NEN9 1154 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 CD101Q93033 1021 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 SECISBP2LQ93073 1101 aaKnown RBP17.31■□□□□ 0.36
COL9A3-208ENST00000469802 LINC00597Q9H2U6 94 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 KRT82Q9NSB4 513 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 DLL3Q9NYJ7 618 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 GMEB2Q9UKD1 530 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 MAPK8IP1Q9UQF2 711 aa17.31■□□□□ 0.36
COL9A3-208ENST00000469802 CCDC163A0A0D9SF12 145 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 ATG13O75143 517 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 NFATC1O95644 943 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 TRIM49P0CI25 452 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 TRIM49CP0CI26 452 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 CCDC130P13994 396 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 YWHAQP27348 245 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 NDST1P52848 882 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 SLC5A3P53794 718 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 PPP3CAQ08209 521 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 SRSF5Q13243 272 aaKnown RBP17.3■□□□□ 0.36
COL9A3-208ENST00000469802 SNX30Q5VWJ9 437 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
COL9A3-208ENST00000469802 UNC93AQ86WB7 457 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 SCAMP5Q8TAC9 235 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 FBXO32Q969P5 355 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 ZFRQ96KR1 1074 aaKnown RBP17.3■□□□□ 0.36
COL9A3-208ENST00000469802 CSNK1G1Q9HCP0 422 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 PARD6AQ9NPB6 346 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 CPQQ9Y646 472 aa17.3■□□□□ 0.36
COL9A3-208ENST00000469802 CLSTN1O94985 981 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 CYP17A1P05093 508 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 ZDHHC11BP0C7U3 371 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 RPL13P26373 211 aaKnown RBP17.29■□□□□ 0.36
COL9A3-208ENST00000469802 OPRD1P41143 372 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 TUBP50607 506 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 IFRD2Q12894 506 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-208ENST00000469802 ORC1Q13415 861 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 SIM2Q14190 667 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-208ENST00000469802 LPAL2Q16609 132 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 PRR23BQ6ZRT6 265 aa17.29■□□□□ 0.36
COL9A3-208ENST00000469802 FILIP1Q7Z7B0 1213 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms