RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SCML2Q9UQR0 700 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 HHLA1C9JL84 531 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 M0QYV0 167 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 SOAT2O75908 522 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 FBXO21O94952 628 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 F11P03951 625 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 HNRNPH3P31942 346 aaKnown RBP13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 PDE4CQ08493 712 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 PRSS36Q5K4E3 855 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 IRF2BP2Q7Z5L9 587 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 TADA2BQ86TJ2 420 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 TMEM110Q86TL2 294 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 ZDHHC17Q8IUH5 632 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 EPS8L1Q8TE68 723 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 MRPS31Q92665 395 aaKnown RBP13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 ZSWIM1Q9BR11 485 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 LRRC4Q9HBW1 653 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 TRPM5Q9NZQ8 1165 aa13.32□□□□□ -0.28
SPTLC1-204ENST00000469778 BEST1O76090 585 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 MYL4P12829 197 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 BMP1P13497 986 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 GABRR2P28476 465 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 GPR15P49685 360 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 TUBP50607 506 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ZNF75DP51815 510 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 SLC5A3P53794 718 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CACNA2D1P54289 1103 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 TFF2Q03403 129 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CLUL1Q15846 466 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ASIC2Q16515 512 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 VPS36Q86VN1 386 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ADHFE1Q8IWW8 467 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ZDHHC14Q8IZN3 488 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 KIAA1958Q8N8K9 716 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 UBA3Q8TBC4 463 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 DDX1Q92499 740 aaKnown RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 SECISBP2LQ93073 1101 aaKnown RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 SLC4A5Q9BY07 1137 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ATXN3LQ9H3M9 355 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 POMKQ9H5K3 350 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 IL21Q9HBE4 155 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 TMEM30AQ9NV96 361 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 EPS15L1Q9UBC2 864 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 MAGED2Q9UNF1 606 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1-204ENST00000469778 ZNF840PA6NDX5 716 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 LRRC53A6NM62 1247 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 ZBED1O96006 694 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 GYPCP04921 128 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 ZDHHC11BP0C7U3 371 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 TKTL1P51854 596 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 TAF10Q12962 218 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 BEND5Q7L4P6 421 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 NOP9Q86U38 636 aaKnown RBP13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 FGF13Q92913 245 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 TASP1Q9H6P5 420 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
SPTLC1-204ENST00000469778 SERPING1P05155 500 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 GLI1P08151 1106 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 GZMAP12544 262 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 LAMP2P13473 410 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 CDC25BP30305 580 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 CASP14P31944 242 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 CDK17Q00537 523 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 KLHL30Q0D2K2 578 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 MTMR3Q13615 1198 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 SDHAF4Q5VUM1 108 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 PMF1Q6P1K2 205 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms