RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 TRPM1Q7Z4N2 1603 aa6.5□□□□□ -1.37
UBE3C-204ENST00000469336 PIK3C2GO75747 1445 aa6.5□□□□□ -1.37
UBE3C-204ENST00000469336 ANKRD50Q9ULJ7 1429 aa6.5□□□□□ -1.37
UBE3C-204ENST00000469336 CGNL1Q0VF96 1302 aa6.5□□□□□ -1.37
UBE3C-204ENST00000469336 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 TPD52L2O43399 206 aaKnown RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 RASSF9O75901 435 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 INMTO95050 263 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 TPM2P07951 284 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 ACVR2AP27037 513 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PPIFP30405 207 aaKnown RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 TERF1P54274 439 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 LILRA4P59901 499 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 FPGSQ05932 587 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 INSCQ1MX18 579 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 MGAT5BQ3V5L5 792 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PLA1AQ53H76 456 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 RHOUQ7L0Q8 258 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 BEND5Q7L4P6 421 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 FANCBQ8NB91 859 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PROKR1Q8TCW9 393 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 OSBPL9Q96SU4 736 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PRRX2Q99811 253 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PNNQ9H307 717 aaKnown RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 UNKLQ9H9P5 680 aaKnown RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 UPF2Q9HAU5 1272 aaKnown RBP6.49□□□□□ -1.37
UBE3C-204ENST00000469336 INTS13Q9NVM9 706 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 ZNF212Q9UDV6 495 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 MID2Q9UJV3 735 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 ITGB1BP2Q9UKP3 347 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 HDAC9Q9UKV0 1011 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 RAPGEF6Q8TEU7 1601 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 KIAA0586Q9BVV6 1533 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 PRAG1Q86YV5 1406 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 ZNF521Q96K83 1311 aa6.49□□□□□ -1.37
UBE3C-204ENST00000469336 ARHGEF5Q12774 1597 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 AREL1O15033 823 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 HSP90AA1P07900 732 aaKnown RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 IL1R2P27930 398 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 CD300EQ496F6 205 aaPredicted RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 TIGD2Q4W5G0 525 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 ZDHHC24Q6UX98 284 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 TMEM108Q6UXF1 575 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 SYNE4Q8N205 404 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 FAM109AQ8N4B1 249 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 KIAA1191Q96A73 305 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 PSMD1Q99460 953 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 PTDSS2Q9BVG9 487 aa6.48□□□□□ -1.37
UBE3C-204ENST00000469336 EIF2AQ9BY44 585 aaKnown RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 CDK13Q14004 1512 aaKnown RBP6.48□□□□□ -1.37
UBE3C-204ENST00000469336 ATP10AO60312 1499 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 KIAA0556O60303 1618 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 URB2Q14146 1524 aaKnown RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 TRGV11A0A075B6L2 103 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 A0A0B4J269 797 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 GOLGA6L3A6NEY3 463 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 TMEM191CA6NGB0 347 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 TRIAP1O43715 76 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 LPXNO60711 386 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 FRAT2O75474 233 aaPredicted RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 SPDEFO95238 335 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 HARSP12081 509 aaKnown RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 MYL4P12829 197 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 ABCB4P21439 1286 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 PROZP22891 400 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 KRT17Q04695 432 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 TUBB3Q13509 450 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 ARHGEF7Q14155 803 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 SLC29A2Q14542 456 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 KRT72Q14CN4 511 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 SLC35G1Q2M3R5 365 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 ARL13BQ3SXY8 428 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 SFRP4Q6FHJ7 346 aaPredicted RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 C1orf228Q6PIY5 440 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 ARHGEF19Q8IW93 802 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 VGLL2Q8N8G2 317 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 MAP7D2Q96T17 732 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 NELL2Q99435 816 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 CAPN11Q9UMQ6 739 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 PDS5BQ9NTI5 1447 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
UBE3C-204ENST00000469336 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 NUP153P49790 1475 aaKnown RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 TARBP1Q13395 1621 aaKnown RBP6.47□□□□□ -1.37
UBE3C-204ENST00000469336 GPATCH8Q9UKJ3 1502 aaKnown RBP6.46□□□□□ -1.37
UBE3C-204ENST00000469336 PBRM1Q86U86 1689 aa6.46□□□□□ -1.37
UBE3C-204ENST00000469336 CENPVL1A0A0U1RR11 272 aa6.46□□□□□ -1.38
UBE3C-204ENST00000469336 F5H697 171 aa6.46□□□□□ -1.38
UBE3C-204ENST00000469336 SYNMO15061 1565 aa6.46□□□□□ -1.38
UBE3C-204ENST00000469336 A1BGP04217 495 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms