RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ADAM17P78536 824 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 SLC34A1Q06495 639 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 CD300CQ08708 224 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 SPIDRQ14159 915 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 SF3B4Q15427 424 aaKnown RBP eCLIP10.36□□□□□ -0.75
NUP50-214ENST00000469163 WASHC2DQ5SRD0 308 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 PDXDC1Q6P996 788 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 RFX8Q6ZV50 586 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 CYP4V2Q6ZWL3 525 aaPredicted RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 GPR142Q7Z601 462 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 TOR1AIP2Q8NFQ8 470 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 U2AF1L4Q8WU68 220 aaKnown RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 ANKRD49Q8WVL7 239 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 LENG9Q96B70 501 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 TBCBQ99426 244 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 TBC1D22BQ9NU19 505 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 STK17AQ9UEE5 414 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 FBXO40Q9UH90 709 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 HTTP42858 3142 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 LTBP3Q9NS15 1303 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 NRXN2Q9P2S2 1712 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 SH3PXD2BA1X283 911 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 PIK3R2O00459 728 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 NCK2O43639 380 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 DCTN3O75935 186 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 ZNF18P17022 549 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 CLK3P49761 638 aaKnown RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
NUP50-214ENST00000469163 PPIL2Q13356 520 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 GIT2Q14161 759 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 TGFBIQ15582 683 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 BTNL9Q6UXG8 535 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 LILRB2Q8N423 598 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 ERP27Q96DN0 273 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 GPATCH1Q9BRR8 931 aaKnown RBP10.36□□□□□ -0.75
NUP50-214ENST00000469163 MLXIPLQ9NP71 852 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 ACP6Q9NPH0 428 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 NDUFA13Q9P0J0 144 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 COMMD10Q9Y6G5 202 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 LAMA4Q16363 1823 aa10.36□□□□□ -0.75
NUP50-214ENST00000469163 TMEM114B3SHH9 223 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 ICMTO60725 284 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 GMNNO75496 209 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 BAG2O95816 211 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 CCNE1P24864 410 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 ZNF200P98182 395 aaPredicted RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 EPHA7Q15375 998 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 ARSHQ5FYA8 562 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 KLHDC10Q6PID8 442 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 ADAT2Q7Z6V5 191 aaKnown RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 EXD1Q8NHP7 514 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 RIN3Q8TB24 985 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 PMEPA1Q969W9 287 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 CYTH2Q99418 400 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 MTMR12Q9C0I1 747 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 AP5M1Q9H0R1 490 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 DPH5Q9H2P9 285 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 KBTBD4Q9NVX7 518 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 UTP11Q9Y3A2 253 aaKnown RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 IGLV3-22A0A075B6J6 115 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 RNF225M0QZC1 329 aaPredicted RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 CXCL11O14625 94 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 NR3C1P04150 777 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 PLEKP08567 350 aaPredicted RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 TCP1P17987 556 aaKnown RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 SLC9A1P19634 815 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 TNFRSF8P28908 595 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 GTF2H1P32780 548 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 IST1P53990 364 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 FKBP3Q00688 224 aaKnown RBP10.35□□□□□ -0.75
NUP50-214ENST00000469163 DR1Q01658 176 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 PPP2R5CQ13362 524 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 TUBA3EQ6PEY2 450 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 STXBP4Q6ZWJ1 553 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 DDX42Q86XP3 938 aaKnown RBP eCLIP10.35□□□□□ -0.75
NUP50-214ENST00000469163 CROCCP3Q8IVE0 287 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 TRIML2Q8N7C3 387 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 PMM1Q92871 262 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 CPB2Q96IY4 423 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 GDF3Q9NR23 364 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 KLK14Q9P0G3 267 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 SPEF1Q9Y4P9 236 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 HES2Q9Y543 173 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 MAD1L1Q9Y6D9 718 aa10.35□□□□□ -0.75
NUP50-214ENST00000469163 H3BUI4 141 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PSMD10O75832 226 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 KRT76Q01546 638 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 TRIM32Q13049 653 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 ITGA9Q13797 1035 aa10.34□□□□□ -0.75
NUP50-214ENST00000469163 PARP6Q2NL67 630 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms