RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 INPP5FQ9Y2H2 1132 aa9.8□□□□□ -0.84
SMC1A-205ENST00000469129 TCRBV7S2A1N4TA0A589 114 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TMEM189-UBE2V1I3L0A0 370 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 M0QZQ0 153 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 PAPSS1O43252 624 aaPredicted RBP9.79□□□□□ -0.84
SMC1A-205ENST00000469129 DAPK3O43293 454 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 HOXA2O43364 376 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 OPA1O60313 960 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TRUB2O95900 331 aaKnown RBP9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
SMC1A-205ENST00000469129 POMCP01189 267 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 LMO2P25791 158 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 OAS2P29728 719 aaKnown RBP9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MIPP30301 263 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 CDKN2BP42772 138 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 KRT17Q04695 432 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TFDP2Q14188 446 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 PDK2Q15119 407 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MDH1BQ5I0G3 518 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 DAB2IPQ5VWQ8 1189 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TTC27Q6P3X3 843 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 DCLRE1AQ6PJP8 1040 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MFSD7Q6UXD7 560 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 CEP128Q6ZU80 1094 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 BBS12Q6ZW61 710 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 ZNF365Q70YC5 407 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 FAM35AQ86V20 835 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MAP7D3Q8IWC1 876 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 FAM126BQ8IXS8 530 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 FUKQ8N0W3 1084 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 THEM5Q8N1Q8 247 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 CCDC89Q8N998 374 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 ATL2Q8NHH9 583 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 SEPT8Q92599 483 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 SMARCD1Q96GM5 515 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 SNF8Q96H20 258 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 ZNF333Q96JL9 665 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TRIM62Q9BVG3 475 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TSPYL1Q9H0U9 437 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 PLEKHA4Q9H4M7 779 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 LRRC4Q9HBW1 653 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 KRT82Q9NSB4 513 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 KLHL11Q9NVR0 708 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TMEM161AQ9NX61 479 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 MIOSQ9NXC5 875 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 WHRNQ9P202 907 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 ASIC3Q9UHC3 531 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 STAP1Q9ULZ2 295 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 USP18Q9UMW8 372 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 NR2E1Q9Y466 385 aa9.79□□□□□ -0.84
SMC1A-205ENST00000469129 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
SMC1A-205ENST00000469129 TTC3P53804 2025 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ZNF487B1APH4 448 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 PI4K2BG5E9Z4 385 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 MDM4O15151 490 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 HCRTO43612 131 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TRAPPC3O43617 180 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 B3GAT3O94766 335 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 LCP1P13796 627 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ATF2P15336 505 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TCF4P15884 667 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 KDELR1P24390 212 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ACAT1P24752 427 aaKnown RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TKTP29401 623 aaKnown RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ECHS1P30084 290 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 FLT3P36888 993 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 CDK7P50613 346 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 FAM193AP78312 1265 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TSPY1Q01534 308 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 GABPB1Q06547 395 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ADIGQ0VDE8 80 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 KRT81Q14533 505 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TAZQ16635 292 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 BOLA3Q53S33 107 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 NOMO2Q5JPE7 1267 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 CLEC20AQ6ZU45 233 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 PIGZQ86VD9 579 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ZDHHC14Q8IZN3 488 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 KCTD6Q8NC69 237 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 C3orf58Q8NDZ4 430 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 MYCBPAPQ8TBZ2 947 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 FAM172AQ8WUF8 416 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 C1orf54Q8WWF1 131 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 SUSD3Q96L08 255 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 FAM193BQ96PV7 902 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 ACBD6Q9BR61 282 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 HEMGNQ9BXL5 484 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 MRPL9Q9BYD2 267 aaKnown RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 TRIM31Q9BZY9 425 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 NGRNQ9NPE2 291 aaKnown RBP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 CRTAC1Q9NQ79 661 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 CHST7Q9NS84 486 aa9.78□□□□□ -0.84
SMC1A-205ENST00000469129 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMC1A-205ENST00000469129 OGDHLQ9ULD0 1010 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms