RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CDR1P51861 262 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ITGA8P53708 1063 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SLC8A3P57103 927 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF200P98182 395 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 IFFO1Q0D2I5 559 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SLC29A2Q14542 456 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 RASA2Q15283 850 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 CCDC14Q49A88 953 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ATP13A4Q4VNC1 1196 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 EFHC1Q5JVL4 640 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 MAP3K21Q5TCX8 1036 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 TWF2Q6IBS0 349 aaKnown RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 PMF1Q6P1K2 205 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 C4orf22Q6V702 233 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 FAM183BPQ6ZVS7 135 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 CYP4V2Q6ZWL3 525 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 STRADAQ7RTN6 431 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ACOT1Q86TX2 421 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 C12orf29Q8N999 325 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 KCTD6Q8NC69 237 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SMC1BQ8NDV3 1235 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 GSTCDQ8NEC7 633 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 OR6B3Q8NGW1 331 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 UBA3Q8TBC4 463 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 RXFP2Q8WXD0 754 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ATG4AQ8WYN0 398 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 LENG1Q96BZ8 264 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 FAF2Q96CS3 445 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 TTC25Q96NG3 672 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SERPINB12Q96P63 405 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ADAM7Q9H2U9 754 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SNX25Q9H3E2 840 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SEMA4AQ9H3S1 761 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 FAM105AQ9NUU6 356 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 TMEM51Q9NW97 253 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 RCOR3Q9P2K3 495 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 TJP2Q9UDY2 1190 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 FETUBQ9UGM5 382 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 SLC12A6Q9UHW9 1150 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 DNPEPQ9ULA0 475 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 TPX2Q9ULW0 747 aaKnown RBP7.98□□□□□ -1.13
COL6A3-208ENST00000468792 ST3GAL5Q9UNP4 418 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 PTPN22Q9Y2R2 807 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 HES2Q9Y543 173 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 NME7Q9Y5B8 376 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 CDY2AQ9Y6F7 541 aa7.98□□□□□ -1.13
COL6A3-208ENST00000468792 FAM170AA1A519 330 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ARHGEF37A1IGU5 675 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CFAP69A5D8W1 941 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 MYADML2A6NDP7 307 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 SPTLC1O15269 473 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 PRPSAP2O60256 369 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CST8O60676 142 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CHRNA1P02708 482 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 THP07101 528 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 FGFR1P11362 822 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 KRT10P13645 584 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ZFXP17010 805 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 TGM2P21980 687 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 HOXD10P28358 340 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ATP5DP30049 168 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 MDH1P40925 334 aaKnown RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 AIF1P55008 147 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 PPP2R2AP63151 447 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 SOX4Q06945 474 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CACNB2Q08289 660 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 PDE4CQ08493 712 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 PTK7Q13308 1070 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 SNX1Q13596 522 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 DSC3Q14574 896 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ZSCAN26Q16670 478 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 KRT71Q3SY84 523 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 DAB2IPQ5VWQ8 1189 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 TXNRD3NBQ6F5E7 133 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 OR6B2Q6IFH4 312 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 GDF6Q6KF10 455 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 BNIPLQ7Z465 357 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ADGRF2Q8IZF7 708 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CNPY4Q8N129 248 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 SCML4Q8N228 414 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 RIBC1Q8N443 379 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 B3GALNT2Q8NCR0 500 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ARRDC4Q8NCT1 418 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 NT5C3BQ969T7 300 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 RTP4Q96DX8 246 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CCDC114Q96M63 670 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF670Q9BS34 389 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 DDX23Q9BUQ8 820 aaKnown RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 DUSP16Q9BY84 665 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 FRMD8Q9BZ67 464 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CXCL16Q9H2A7 254 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CWC15Q9P013 229 aaKnown RBP7.97□□□□□ -1.13
COL6A3-208ENST00000468792 CALCOCO1Q9P1Z2 691 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF148Q9UQR1 794 aa7.97□□□□□ -1.13
COL6A3-208ENST00000468792 A0A0U1RQF3 1178 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 MOXD2PA6NHM9 499 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 PI4K2BG5E9Z4 385 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms