RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CASP8AP2Q9UKL3 1982 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 C17orf102A2RUQ5 167 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 LRRIQ4A6NIV6 560 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SMTNL1A8MU46 457 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NUDT19A8MXV4 375 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KBTBD13C9JR72 458 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 GOLGA6L19H0YKK7 550 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 K7ENM7 598 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 WNT9AO14904 365 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MAGEB2O15479 319 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KPNA6O60684 536 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MAFO75444 373 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 DGKIO75912 1065 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 RHOBTB3O94955 611 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 CLSTN1O94985 981 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 RASGRP1O95267 797 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NTRK1P04629 796 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MYL1P05976 194 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 GJB1P08034 283 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 CYP2C9P11712 490 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 GAP43P17677 238 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 TMOD1P28289 359 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PRCPP42785 496 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MATR3P43243 847 aaKnown RBP eCLIP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SLC6A11P48066 632 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MAPKAPK2P49137 400 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SLC26A2P50443 739 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 DNM2P50570 870 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 CLCN3P51790 818 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 YBX1P67809 324 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PURAQ00577 322 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 DRP2Q13474 957 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 STIM1Q13586 685 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KCNB1Q14721 858 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 EMC2Q15006 297 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 TARBP2Q15633 366 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PLEKHN1Q494U1 663 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 ZC2HC1CQ53FD0 456 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 HSP90AA4PQ58FG1 418 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FAM26FQ5R3K3 315 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MAP3K21Q5TCX8 1036 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NT5DC1Q5TFE4 455 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NFRKBQ6P4R8 1299 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FBXO46Q6PJ61 603 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MTHFD1LQ6UB35 978 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FGD2Q7Z6J4 655 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 LUZP1Q86V48 1076 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MYOCDQ8IZQ8 938 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 AOPEPQ8N6M6 819 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 TRIML1Q8N9V2 468 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MLKLQ8NB16 471 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PCSK9Q8NBP7 692 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 ARRDC4Q8NCT1 418 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 MCPH1Q8NEM0 835 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KLHDC9Q8NEP7 349 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 DEPTORQ8TB45 409 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 TCP11Q8WWU5 503 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PRPF31Q8WWY3 499 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NELFBQ8WX92 580 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NINJ1Q92982 152 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PEX11GQ96HA9 241 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SCLYQ96I15 445 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 SCLT1Q96NL6 688 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FUCA2Q9BTY2 467 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KIFC3Q9BVG8 833 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KATNAL1Q9BW62 490 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FGFBP2Q9BYJ0 223 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 NAT10Q9H0A0 1025 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 UPF3AQ9H1J1 476 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 EPB41L4BQ9H329 900 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF552Q9H707 407 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 XPNPEP1Q9NQW7 623 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 INTS7Q9NVH2 962 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 KLHL14Q9P2G3 628 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 LARSQ9P2J5 1176 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 GINS2Q9Y248 185 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 PCDHA9Q9Y5H5 950 aa4.46□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF236Q9UL36 1845 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 A0A087WZ62 844 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TCRBV16S1A1N1A0A5B0 115 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DENND3A2RUS2 1198 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 TRIM49BA6NDI0 452 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 LRRC10BA6NIK2 292 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 HAS3O00219 553 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 CLIC2O15247 247 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 CSDE1O75534 798 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 DNAJC8O75937 253 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 VTNP04004 478 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ASLP04424 464 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 GNAT1P11488 350 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 IBSPP21815 317 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 GLRA2P23416 452 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 IGFALSP35858 605 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 ARL2P36404 184 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 NPTX2P47972 431 aa4.45□□□□□ -1.7
TMEM39A-204ENST00000468545 CASP5P51878 434 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms