RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TCHPQ9BT92 498 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 STK33Q9BYT3 514 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 ASAH2Q9NR71 780 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
PRPF3-203ENST00000467514 REXO2Q9Y3B8 237 aaKnown RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 EPN1Q9Y6I3 576 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-203ENST00000467514 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 F8VZ95 297 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 I3L4J1 428 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 DPYSL4O14531 572 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 RPP40O75818 363 aaKnown RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 NDUFA10O95299 355 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 LCA5LO95447 670 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 SERPING1P05155 500 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 COL4A2P08572 1712 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF806P0C7X5 589 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 DLATP10515 647 aaKnown RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 HARSP12081 509 aaKnown RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 FGFR3P22607 806 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 VIPR2P41587 438 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 PRKCIP41743 596 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 AP3M2P53677 418 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ROR1Q01973 937 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF252P-AS1Q0IIN9 211 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 CETN1Q12798 172 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 SURF1Q15526 300 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 KYAT1Q16773 422 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 GLRA4Q5JXX5 417 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 DGKKQ5KSL6 1271 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 SFMBT2Q5VUG0 894 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 TDRD10Q5VZ19 366 aaKnown RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 Q6ZS52 159 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 WDR49Q8IV35 697 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ARHGEF19Q8IW93 802 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 FBXL13Q8NEE6 735 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 TTC8Q8TAM2 541 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ZSCAN18Q8TBC5 510 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 C8orf33Q9H7E9 229 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 AVENQ9NQS1 362 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 ZNHIT6Q9NWK9 470 aaKnown RBP11.73□□□□□ -0.53
PRPF3-203ENST00000467514 RAB20Q9NX57 234 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 DNAJC12Q9UKB3 198 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 INSL5Q9Y5Q6 135 aa11.73□□□□□ -0.53
PRPF3-203ENST00000467514 SHISA7A6NL88 538 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 HEPACAM2A8MVW5 462 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 PTGESO14684 152 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 IL18RAPO95256 599 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 HLA-DRAP01903 254 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 PLEKP08567 350 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 MPLP40238 635 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 GRM5P41594 1212 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 MATR3P43243 847 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 SOX9P48436 509 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 GAS6Q14393 721 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 DRAP1Q14919 205 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 PRSS36Q5K4E3 855 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 LMBRD2Q68DH5 695 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 WDR5BQ86VZ2 330 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 ZNF461Q8TAF7 563 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 E2F7Q96AV8 911 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 LOXL4Q96JB6 756 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 EDEM2Q9BV94 578 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 SMOC1Q9H4F8 434 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 NHEJ1Q9H9Q4 299 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-203ENST00000467514 TRPV5Q9NQA5 729 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 RXFP3Q9NSD7 469 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 NUB1Q9Y5A7 615 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 BACE2Q9Y5Z0 518 aa11.72□□□□□ -0.53
PRPF3-203ENST00000467514 ARHGEF37A1IGU5 675 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 H7C4K7 107 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 K7ESF4 209 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 CCP110O43303 1012 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 EPN2O95208 641 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 CPB1P15086 417 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 GJA1P17302 382 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 TNNI1P19237 187 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 SOX5P35711 763 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 EIF4A3P38919 411 aaKnown RBP11.71□□□□□ -0.53
PRPF3-203ENST00000467514 STAT1P42224 750 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 BRCC3P46736 316 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 PXNP49023 591 aaPredicted RBP11.71□□□□□ -0.53
PRPF3-203ENST00000467514 CLCNKBP51801 687 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 TWF1Q12792 350 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 PON2Q15165 354 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 ASIC2Q16515 512 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 DAB2IPQ5VWQ8 1189 aa11.71□□□□□ -0.53
PRPF3-203ENST00000467514 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms