RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 HSPA1AP0DMV8 641 aaKnown RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 HSPA1BP0DMV9 641 aaKnown RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 PDGFRAP16234 1089 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 FGFR3P22607 806 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 FNTAP49354 379 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 MRPL58Q14197 206 aaKnown RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 SIX1Q15475 284 aaPredicted RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 MAP9Q49MG5 647 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 CENPIQ92674 756 aaPredicted RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 PAWRQ96IZ0 340 aaKnown RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 TBCBQ99426 244 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 SMOQ99835 787 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 LRRC1Q9BTT6 524 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 C11orf84Q9BUA3 381 aaPredicted RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 TRIM62Q9BVG3 475 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 AP1M1Q9BXS5 423 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 DMAP1Q9NPF5 467 aaPredicted RBP9.91□□□□□ -0.82
PRPF3-202ENST00000467329 CNGB3Q9NQW8 809 aa9.91□□□□□ -0.82
PRPF3-202ENST00000467329 TBKBP1A7MCY6 615 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 ZNF487B1APH4 448 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 CLDN5O00501 218 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 NRP1O14786 923 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 ATP8B1O43520 1251 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 TRUB2O95900 331 aaKnown RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SDC4P31431 198 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SLC11A1P49279 550 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 RNASE9P60153 205 aaKnown RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SMARCB1Q12824 385 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 NFE2Q16621 373 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 PAN2Q504Q3 1202 aaKnown RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 TRNP1Q6NT89 227 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 BEND5Q7L4P6 421 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 IFT20Q8IY31 132 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SIX6OS1Q8N1H7 587 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 ARFGAP1Q8N6T3 406 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 EMC1Q8N766 993 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 PRELID2Q8N945 189 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 OR10T2Q8NGX3 314 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SLCO2A1Q92959 643 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 VWCEQ96DN2 955 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SLITRK1Q96PX8 696 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SLC2A13Q96QE2 648 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 FRMD8P1Q9BZ68 369 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 LRRC19Q9H756 370 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 GDF3Q9NR23 364 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 TMEM51Q9NW97 253 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 MARCH5Q9NX47 278 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 DNAJB4Q9UDY4 337 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 PCYOX1Q9UHG3 505 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 FAN1Q9Y2M0 1017 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 NLRC5Q86WI3 1866 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 COL4A6Q14031 1691 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 PTPRDP23468 1912 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 HHLA1C9JL84 531 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 H7C4K7 107 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 BAIAP3O94812 1187 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 AMHP03971 560 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 FLT3P36888 993 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 MAGEA11P43364 429 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 CLCN6P51797 869 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 VSNL1P62760 191 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 MRPS5P82675 430 aaKnown RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 KLF1Q13351 362 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 CCDC14Q49A88 953 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 TMCO3Q6UWJ1 677 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 STRADAQ7RTN6 431 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 SCUBE3Q8IX30 993 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 KLHL7Q8IXQ5 586 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 ZMIZ2Q8NF64 920 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 CMASQ8NFW8 434 aaPredicted RBP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 OSBPL8Q9BZF1 889 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 EPC1Q9H2F5 836 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 RRN3Q9NYV6 651 aa9.9□□□□□ -0.82
PRPF3-202ENST00000467329 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRPF3-202ENST00000467329 RAD51CO43502 376 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 DGKIO75912 1065 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 EFEMP2O95967 443 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 GALTP07902 379 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 RARAP10276 462 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 LCP1P13796 627 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 MIPP30301 263 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 MAP3K7CLP57077 242 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 ADIGQ0VDE8 80 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 ZNF280DQ6N043 979 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 MFSD5Q6N075 450 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 AADACL2Q6P093 401 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 SYDE1Q6ZW31 735 aaPredicted RBP9.89□□□□□ -0.83
PRPF3-202ENST00000467329 DEFB128Q7Z7B8 93 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 TMEM199Q8N511 208 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 HASPINQ8TF76 798 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 SEC14L1Q92503 715 aa9.89□□□□□ -0.83
PRPF3-202ENST00000467329 PIWIL1Q96J94 861 aaKnown RBP9.89□□□□□ -0.83
PRPF3-202ENST00000467329 ARFGAP3Q9NP61 516 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms