RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TMEM171Q8WVE6 324 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 APIPQ96GX9 242 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 FSD1LQ9BXM9 530 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 STK31Q9BXU1 1019 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 ZNF287Q9HBT7 754 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 DUSP22Q9NRW4 184 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 SERGEFQ9UGK8 458 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 CCNL1Q9UK58 526 aaPredicted RBP4.56□□□□□ -1.68
VPS50-209ENST00000467326 TBC1D30Q9Y2I9 924 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 CDY1Q9Y6F8 540 aa4.56□□□□□ -1.68
VPS50-209ENST00000467326 POLR2AP24928 1970 aaKnown RBP4.55□□□□□ -1.68
VPS50-209ENST00000467326 LOC102723971A0A1B0GUV8 181 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 TARM1B6A8C7 271 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 CCP110O43303 1012 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 SRGAP2O75044 1071 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 RASSF9O75901 435 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 VNN1O95497 513 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 MYF5P13349 255 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 ZKSCAN1P17029 563 aaPredicted RBP4.55□□□□□ -1.68
VPS50-209ENST00000467326 FMO1Q01740 532 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 HDAC1Q13547 482 aaPredicted RBP4.55□□□□□ -1.68
VPS50-209ENST00000467326 INSCQ1MX18 579 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 C4orf46Q504U0 113 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 CCSAPQ6IQ19 270 aaPredicted RBP4.55□□□□□ -1.68
VPS50-209ENST00000467326 ZDHHC24Q6UX98 284 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 IZUMO1Q8IYV9 350 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 FANCBQ8NB91 859 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 DNAJB14Q8TBM8 379 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 C8orf48Q96LL4 319 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 SH3BP4Q9P0V3 963 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 COL20A1Q9P218 1284 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 HDAC9Q9UKV0 1011 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 GABRQQ9UN88 632 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 ADAMTS5Q9UNA0 930 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 FRMD4BQ9Y2L6 1034 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 PCDHGB6Q9Y5F9 930 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 COMMD10Q9Y6G5 202 aa4.55□□□□□ -1.68
VPS50-209ENST00000467326 LINC01548A6NM66 108 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 ZNF213O14771 459 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 WDHD1O75717 1129 aaPredicted RBP4.54□□□□□ -1.68
VPS50-209ENST00000467326 TJP3O95049 919 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 RASAL1O95294 804 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 HSP90AA1P07900 732 aaKnown RBP4.54□□□□□ -1.68
VPS50-209ENST00000467326 FAM163BP0C2L3 166 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 PAX3P23760 479 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 ACVR2AP27037 513 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 CTGFP29279 349 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 MTHFSP49914 203 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 SEMA5AQ13591 1074 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 PCID2Q5JVF3 399 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 COLEC12Q5KU26 742 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 WDR78Q5VTH9 848 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 SLC9A4Q6AI14 798 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 DPY19L3Q6ZPD9 716 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 Q6ZWC4 215 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 PARS2Q7L3T8 475 aaKnown RBP4.54□□□□□ -1.68
VPS50-209ENST00000467326 CAND1Q86VP6 1230 aaKnown RBP4.54□□□□□ -1.68
VPS50-209ENST00000467326 SESTD1Q86VW0 696 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 DGKHQ86XP1 1220 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 TMTC2Q8N394 836 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 PPP2R3CQ969Q6 453 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 REPS1Q96D71 796 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 C17orf80Q9BSJ5 609 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 BTBD1Q9H0C5 482 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 GBA2Q9HCG7 927 aaPredicted RBP4.54□□□□□ -1.68
VPS50-209ENST00000467326 XPNPEP3Q9NQH7 507 aa4.54□□□□□ -1.68
VPS50-209ENST00000467326 WIPF3A6NGB9 483 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 H7C4K7 107 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 KIF3BO15066 747 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 RRP9O43818 475 aaKnown RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 JTBO76095 146 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 PRKCGP05129 697 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 PRKCBP05771 671 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 DLDP09622 509 aaKnown RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 IL1R1P14778 569 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 PTDSS1P48651 473 aaKnown RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 BCAT1P54687 386 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 CYP4F2P78329 520 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 SLC10A2Q12908 348 aaPredicted RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 CCNIQ14094 377 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 CYP1B1Q16678 543 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 PTCHD3Q3KNS1 767 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 TMEM119Q4V9L6 283 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 CYB5RLQ6IPT4 315 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 NAPRTQ6XQN6 538 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 NME8Q8N427 588 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 ABHD11Q8NFV4 315 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 SMCR8Q8TEV9 937 aaPredicted RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 TTC17Q96AE7 1141 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 MSLNLQ96KJ4 702 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 NAP1L4Q99733 375 aaKnown RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 DPCDQ9BVM2 203 aaPredicted RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 MAF1Q9H063 256 aa4.53□□□□□ -1.68
VPS50-209ENST00000467326 DNMT3BQ9UBC3 853 aaKnown RBP4.53□□□□□ -1.68
VPS50-209ENST00000467326 COL11A2P13942 1736 aaPredicted RBP4.52□□□□□ -1.69
VPS50-209ENST00000467326 AOX1Q06278 1338 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 RAB27BO00194 218 aa4.52□□□□□ -1.69
VPS50-209ENST00000467326 CD3EAPO15446 510 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms