RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
HLA-C-205ENST00000466892 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
HLA-C-205ENST00000466892 CCDC85BQ15834 202 aaPredicted RBP17.22■□□□□ 0.35
HLA-C-205ENST00000466892 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
HLA-C-205ENST00000466892 ATAT1Q5SQI0 421 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 TMEM110Q86TL2 294 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 UBA3Q8TBC4 463 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 IPO4Q8TEX9 1081 aaKnown RBP17.22■□□□□ 0.35
HLA-C-205ENST00000466892 SLC20A1Q8WUM9 679 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 SLITRK1Q96PX8 696 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 LRRC4Q9HBW1 653 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 CNGB3Q9NQW8 809 aa17.22■□□□□ 0.35
HLA-C-205ENST00000466892 CLUHO75153 1309 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 CALCAP01258 141 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 UNGP13051 313 aaPredicted RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 TNFAIP3P21580 790 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 FECHP22830 423 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 YWHAQP27348 245 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 CDC25CP30307 473 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 GPR15P49685 360 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 PSEN1P49768 467 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 NOMO3P69849 1222 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 DLX2Q07687 328 aaPredicted RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 RARS2Q5T160 578 aaKnown RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 PMF1Q6P1K2 205 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 TMC5Q6UXY8 1006 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 ZNF571Q7Z3V5 609 aaPredicted RBP17.21■□□□□ 0.35
HLA-C-205ENST00000466892 SIX6OS1Q8N1H7 587 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 ARHGAP18Q8N392 663 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 IRGQQ8WZA9 623 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 LRRC3Q9BY71 257 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 ARHGAP20Q9P2F6 1191 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 SCML2Q9UQR0 700 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 SZT2Q5T011 3432 aa17.21■□□□□ 0.35
HLA-C-205ENST00000466892 PRRC2BQ5JSZ5 2229 aaKnown RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 PFKLP17858 780 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 SCNN1AP37088 669 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 NSFP46459 744 aaKnown RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 TKTL1P51854 596 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 CLEC16AQ2KHT3 1053 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 LEXMQ3ZCV2 418 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 SNX30Q5VWJ9 437 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 PM20D1Q6GTS8 502 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 EP400NLQ6ZTU2 488 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 PDZD4Q76G19 769 aaPredicted RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 TMC8Q8IU68 726 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 WDTC1Q8N5D0 677 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 C1orf131Q8NDD1 294 aaKnown RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 GIPC2Q8TF65 315 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 SUSD6Q92537 303 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 VCPIP1Q96JH7 1222 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 PPP1R13BQ96KQ4 1090 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 WDR6Q9NNW5 1121 aaKnown RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 DNMT3BQ9UBC3 853 aaKnown RBP17.2■□□□□ 0.34
HLA-C-205ENST00000466892 STRIP2Q9ULQ0 834 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 FAM50BQ9Y247 325 aa17.2■□□□□ 0.34
HLA-C-205ENST00000466892 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 TULP2O00295 520 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 ZBED1O96006 694 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 RHOP08100 348 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CFHP08603 1231 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 SKILP12757 684 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 KCNA5P22460 613 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 MMP8P22894 467 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 DDX6P26196 483 aaKnown RBP eCLIP17.19■□□□□ 0.347e-14■■□□□ 12.5
HLA-C-205ENST00000466892 GABRB2P47870 512 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CDR1P51861 262 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 GSCP56915 257 aaPredicted RBP17.19■□□□□ 0.34
HLA-C-205ENST00000466892 AAK1Q2M2I8 961 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 SDHAF4Q5VUM1 108 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 MON1AQ86VX9 555 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 PHF13Q86YI8 300 aaPredicted RBP17.19■□□□□ 0.34
HLA-C-205ENST00000466892 TMTC1Q8IUR5 882 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 C12orf76Q8N812 135 aaPredicted RBP17.19■□□□□ 0.34
HLA-C-205ENST00000466892 SLC30A5Q8TAD4 765 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 FBXO32Q969P5 355 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CCDC42Q96M95 316 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CORO1BQ9BR76 489 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 ST7Q9NRC1 585 aa17.19■□□□□ 0.34
HLA-C-205ENST00000466892 CALB1P05937 261 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 TUBP50607 506 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
HLA-C-205ENST00000466892 ADIGQ0VDE8 80 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 SLC18A3Q16572 532 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 NAA35Q5VZE5 725 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 BEND5Q7L4P6 421 aa17.18■□□□□ 0.34
HLA-C-205ENST00000466892 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms