RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF395Q9H8N7 513 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF277Q9NRM2 450 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 FBXO40Q9UH90 709 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 PLA2G4CQ9UP65 541 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ADGRA2Q96PE1 1338 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 WDR46O15213 610 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 RGS20O76081 388 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 INHBAP08476 426 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 CDH5P33151 784 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 EMC2Q15006 297 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 TAF5Q15542 800 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 PANX3Q96QZ0 392 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 FRMD8P1Q9BZ68 369 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 DDX43Q9NXZ2 648 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 SLC9A2Q9UBY0 812 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 KIAA1217Q5T5P2 1943 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 KLHL33A6NCF5 533 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 F8W8V4 182 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 AVILO75366 819 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ASNSP08243 561 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 UBTFL6P0CB48 400 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 EIF3EP60228 445 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 BST1Q10588 318 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ZRSR2Q15696 482 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 PTPN20Q4JDL3 420 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 DDX50Q9BQ39 737 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 KCNK4Q9NYG8 393 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 TRIM49D1C9J1S8 452 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 STAM2O75886 525 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 PSAPP07602 524 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 NR3C2P08235 984 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ANPEPP15144 967 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 POLE2P56282 527 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 MYL6P60660 151 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 SLFN12LQ6IEE8 588 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 RIPOR1Q6ZS17 1223 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 GPRASP2Q96D09 838 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ETAA1Q9NY74 926 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 CYTH4Q9UIA0 394 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 LRRIQ4A6NIV6 560 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 K7ERI5 159 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 COPEO14579 308 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ATG7O95352 703 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 KRT7P08729 469 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 RBP3P10745 1247 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 EIF4BP23588 611 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 TGFB2P61812 414 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 MRPS5P82675 430 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 MYLK4Q86YV6 388 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 RFX6Q8HWS3 928 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 EMC1Q8N766 993 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 FGD4Q96M96 766 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 PPARGC1AQ9UBK2 798 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 ANGPTL2Q9UKU9 493 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 PPME1Q9Y570 386 aa13.55□□□□□ -0.24
PDZRN3-205ENST00000466780 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 LDHAP00338 332 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 LYNP07948 512 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 KRT3P12035 628 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 TNFSF9P41273 254 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 ACTR2P61160 394 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 KCNJ11Q14654 390 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 GSTA3Q16772 222 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 NPNTQ6UXI9 565 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 NET1Q7Z628 596 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 ULK2Q8IYT8 1036 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 C7orf26Q96N11 449 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 PCSK1NQ9UHG2 260 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 SLC7A8Q9UHI5 535 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 TTLL3Q9Y4R7 772 aa13.54□□□□□ -0.24
PDZRN3-205ENST00000466780 APOC4-APOC2K7ER74 178 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms