RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PCDHGB3Q9Y5G1 929 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 AQP12BA6NM10 295 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 VIPP01282 170 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 CD19P15391 556 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 VEGFAP15692 232 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 PECAM1P16284 738 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 MST1P26927 711 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 MAGEA10P43363 369 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 PGDP52209 483 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 CTSWP56202 376 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 POU5F1BQ06416 359 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 TIGD2Q4W5G0 525 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 USP39Q53GS9 565 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 ARHGAP15Q53QZ3 475 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 ARHGEF19Q8IW93 802 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 IZUMO1Q8IYV9 350 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 NRSN1Q8IZ57 195 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 LNX2Q8N448 690 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 MBD3L2Q8NHZ7 208 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 STT3BQ8TCJ2 826 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 OTUD7AQ8TE49 926 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 STYXQ8WUJ0 223 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 OSCP1Q8WVF1 389 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 ATRIPQ8WXE1 791 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 LENG9Q96B70 501 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 RSPRY1Q96DX4 576 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 C8orf49Q96NF6 230 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 HIST1H2AAQ96QV6 131 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 ADAM2Q99965 735 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 SORBS1Q9BX66 1292 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 TP63Q9H3D4 680 aaPredicted RBP5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 TRIM36Q9NQ86 728 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 GRHPRQ9UBQ7 328 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 VPS51Q9UID3 782 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 SERTAD3Q9UJW9 196 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 TSC22D4Q9Y3Q8 395 aa5.1□□□□□ -1.59
CDC42BPA-211ENST00000466538 COL15A1P39059 1388 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 IRAK2O43187 625 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 PROM1O43490 865 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 SPDEFO95238 335 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 SRGAP2BP0DMP2 458 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 ARP10275 920 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 PAX3P23760 479 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 PTGS2P35354 604 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 GPS1Q13098 491 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 CLCA4Q14CN2 919 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 ABLIM2Q6H8Q1 611 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 TTC30AQ86WT1 665 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 CCDC117Q8IWD4 279 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 SYNE4Q8N205 404 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 B3GALNT2Q8NCR0 500 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 ATG4AQ8WYN0 398 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 HAS1Q92839 578 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 GRAMD1AQ96CP6 724 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 PGBD1Q96JS3 809 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 ACTRT3Q9BYD9 372 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 AS3MTQ9HBK9 375 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 CASS4Q9NQ75 786 aa5.09□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZAR1LA6NP61 321 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TRIM38O00635 465 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ASNA1O43681 348 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TNFRSF6BO95407 300 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ONECUT2O95948 504 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ANXA6P08133 673 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 NR4A1P22736 598 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ATXN1P54253 815 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ALDH18A1P54886 795 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TIRAPP58753 221 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 BLOC1S1P78537 153 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 POSTNQ15063 836 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 PTPRRQ15256 657 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 NRN1LQ496H8 165 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 FBLN7Q53RD9 439 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TEDDM1Q5T9Z0 273 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ATPAF1Q5TC12 328 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ABHD17BQ5VST6 288 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 JMJD6Q6NYC1 403 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 KLHL17Q6TDP4 642 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 RINLQ6ZS11 566 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 SLC30A5Q8TAD4 765 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 SUN3Q8TAQ9 357 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 PNISRQ8TF01 805 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TMEM171Q8WVE6 324 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 WDR60Q8WVS4 1066 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 SDCCAG3Q96C92 435 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 EVI5LQ96CN4 794 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 TBATAQ96M53 351 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 NAP1L4Q99733 375 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 C17orf80Q9BSJ5 609 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 DDX23Q9BUQ8 820 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 UBA5Q9GZZ9 404 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 SAYSD1Q9NPB0 183 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 ANAPC4Q9UJX5 808 aa5.08□□□□□ -1.6
CDC42BPA-211ENST00000466538 SCAF8Q9UPN6 1271 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms