RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ANAPC1Q9H1A4 1944 aa15.81■□□□□ 0.12
HMGXB4-206ENST00000466438 TMEM60Q9H2L4 133 aa15.81■□□□□ 0.12
HMGXB4-206ENST00000466438 TMLHEQ9NVH6 421 aa15.81■□□□□ 0.12
HMGXB4-206ENST00000466438 DNMT3LQ9UJW3 386 aa15.81■□□□□ 0.12
HMGXB4-206ENST00000466438 NFE2L3Q9Y4A8 694 aa15.81■□□□□ 0.12
HMGXB4-206ENST00000466438 MYO18AQ92614 2054 aaKnown RBP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 A0A1W2PQF6 199 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 PYCARD-AS1I3L0S3 204 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 LEFTY2O00292 366 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 PIRO00625 290 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 CYB561D2O14569 222 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 SLC9A3R1O14745 358 aaPredicted RBP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 WISP1O95388 367 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 ADH1CP00326 375 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 NFICP08651 508 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 NDUFV2P19404 249 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 NFE2Q16621 373 aaPredicted RBP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 HAUS3Q68CZ6 603 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 PHTF2Q8N3S3 785 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 SNIP1Q8TAD8 396 aaKnown RBP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 LEO1Q8WVC0 666 aaPredicted RBP15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 WBP1Q96G27 269 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 BRMS1Q9HCU9 246 aa15.8■□□□□ 0.12
HMGXB4-206ENST00000466438 ANO9A1A5B4 782 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 B8ZZF3 427 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 SLC16A4O15374 487 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 HIP1RO75146 1068 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 ADH5P11766 374 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 PFKLP17858 780 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 TNFSF9P41273 254 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 MATR3P43243 847 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 ATP2C1P98194 919 aaPredicted RBP15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 SEMG2Q02383 582 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 STK3Q13188 491 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 SUZ12Q15022 739 aaKnown RBP15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 KYAT1Q16773 422 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 ME3Q16798 604 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 HLA-BQ31612 363 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 C6orf118Q5T5N4 469 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 WSCD1Q658N2 575 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 DHRS13Q6UX07 377 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 ZCCHC9Q8N567 271 aaKnown RBP15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 PYM1Q9BRP8 204 aaKnown RBP15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 HAPLN2Q9GZV7 340 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 CD248Q9HCU0 757 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 ABCB6Q9NP58 842 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 CHMP5Q9NZZ3 219 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
HMGXB4-206ENST00000466438 TBC1D3BA6NDS4 549 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 MEI4A8MW99 385 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 ADRB2P07550 413 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 NTSR1P30989 418 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 TSPY1Q01534 308 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 BNC1Q01954 994 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 ENOX2Q16206 610 aaKnown RBP15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 ECM1Q16610 540 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 CCDC157Q569K6 752 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 RHBDF2Q6PJF5 856 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 CCDC83Q8IWF9 413 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 ENGASEQ8NFI3 743 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 SPOCK2Q92563 424 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 NTPCRQ9BSD7 190 aaKnown RBP15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 CCSER1Q9C0I3 900 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 CD93Q9NPY3 652 aa15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.78■□□□□ 0.12
HMGXB4-206ENST00000466438 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 PFKFB2O60825 505 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 NTRK1P04629 796 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 CYP2F1P24903 491 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 WASP42768 502 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 TAF6P49848 677 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 CXADRP78310 365 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 TLE3Q04726 772 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 MYO1EQ12965 1108 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 MAPK7Q13164 816 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 PREPLQ4J6C6 727 aaPredicted RBP15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 JADE1Q6IE81 842 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 IPO4Q8TEX9 1081 aaKnown RBP15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 MIR1-1HGQ9H1L0 117 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 RPF1Q9H9Y2 349 aaKnown RBP15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 SMC3Q9UQE7 1217 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 AK5Q9Y6K8 562 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 KNTC1P50748 2209 aa15.77■□□□□ 0.12
HMGXB4-206ENST00000466438 COL5A1P20908 1838 aaPredicted RBP15.77■□□□□ 0.11
HMGXB4-206ENST00000466438 SCN1AP35498 2009 aa15.77■□□□□ 0.11
HMGXB4-206ENST00000466438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 BCAT2O15382 392 aaPredicted RBP15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 CD6P30203 668 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 HNF1BP35680 557 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 IL12RB1P42701 662 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 GRK6P43250 576 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 SLC7A9P82251 487 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 RHDQ02161 417 aa15.76■□□□□ 0.11
HMGXB4-206ENST00000466438 C10orf76Q5T2E6 689 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms