RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TMEM175Q9BSA9 504 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 ZNF518BQ9C0D4 1074 aa19.59■□□□□ 0.73
CAPN3-209ENST00000466222 TTC7AQ9ULT0 858 aaPredicted RBP19.59■□□□□ 0.73
CAPN3-209ENST00000466222 CEP104O60308 925 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 GJB5O95377 273 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 DNA2P51530 1060 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 VARS2Q5ST30 1063 aaKnown RBP19.58■□□□□ 0.72
CAPN3-209ENST00000466222 FOXR1Q6PIV2 292 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 KCNT2Q6UVM3 1135 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 KDM7AQ6ZMT4 941 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 SLC35F5Q8WV83 523 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 LRRC45Q96CN5 670 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 ACBD6Q9BR61 282 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 DSEQ9UL01 958 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 CDH9Q9ULB4 789 aa19.58■□□□□ 0.72
CAPN3-209ENST00000466222 CHD9Q3L8U1 2897 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 TRAPPC3O43617 180 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 BUB1BO60566 1050 aaPredicted RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 TYMPP19971 482 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 PPP2R5EQ16537 467 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 SMYD5Q6GMV2 418 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 RSPO2Q6UXX9 243 aaPredicted RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 ANKRD52Q8NB46 1076 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 MYCBPAPQ8TBZ2 947 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 ARL8AQ96BM9 186 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 PIWIL1Q96J94 861 aaKnown RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 KCNK16Q96T55 309 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 PKMYT1Q99640 499 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 MED10Q9BTT4 135 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 HESX1Q9UBX0 185 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 LCMT1Q9UIC8 334 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 HMGB1P1B2RPK0 211 aaPredicted RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 E5RJQ4 531 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 PCSK1P29120 753 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 CORO7P57737 925 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 GNGT1P63211 74 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 MAMLD1Q13495 774 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 INTS6LQ5JSJ4 861 aaKnown RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 KLHL7Q8IXQ5 586 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 CCDC26Q8TAB7 109 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 MYLPFQ96A32 169 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 HES6Q96HZ4 224 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 IGSF21Q96ID5 467 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 HNRNPABQ99729 332 aaKnown RBP19.57■□□□□ 0.72
CAPN3-209ENST00000466222 AMFRQ9UKV5 643 aa19.57■□□□□ 0.72
CAPN3-209ENST00000466222 SF3B1O75533 1304 aaKnown RBP eCLIP19.56■□□□□ 0.72
CAPN3-209ENST00000466222 LCHNA4D1U4 455 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 SRRM3A6NNA2 597 aaPredicted RBP19.56■□□□□ 0.72
CAPN3-209ENST00000466222 GOLGA8SH3BPF8 625 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 OAZ2O95190 189 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 FAM153BP0C7A2 387 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 MAGEA9P43362 315 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 RPL7AP62424 266 aaKnown RBP19.56■□□□□ 0.72
CAPN3-209ENST00000466222 FAM153CQ494X1 144 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 FAM171BQ6P995 826 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 PRSS55Q6UWB4 352 aaPredicted RBP19.56■□□□□ 0.72
CAPN3-209ENST00000466222 NT5DC3Q86UY8 548 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 ZNF564Q8TBZ8 553 aaPredicted RBP19.56■□□□□ 0.72
CAPN3-209ENST00000466222 ZBED2Q9BTP6 218 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 FAM153AQ9UHL3 310 aa19.56■□□□□ 0.72
CAPN3-209ENST00000466222 TMEM110-MUSTN1A8MSY1 372 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 FGFR3P22607 806 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 PAX3P23760 479 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 MAP3K7CLP57077 242 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 MTMR3Q13615 1198 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 STILQ15468 1287 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 MAATS1Q7Z4T9 603 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 DAAM2Q86T65 1068 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 SCUBE3Q8IX30 993 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 THEM5Q8N1Q8 247 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 PIK3R5Q8WYR1 880 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 SYNCQ9H7C4 482 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 KRT82Q9NSB4 513 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 TCRBV5S1A1TA0A578 114 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 ESYT3A0FGR9 886 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 ZSCAN5CA6NGD5 496 aaPredicted RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 EBAG9O00559 213 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 BDNFP23560 247 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 ARPP19P56211 112 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 BST2Q10589 180 aaKnown RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 MRPL58Q14197 206 aaKnown RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 SLC39A12Q504Y0 691 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 DAB2IPQ5VWQ8 1189 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 PLEKHA7Q6IQ23 1121 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 CLEC20AQ6ZU45 233 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 FAM35AQ86V20 835 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 XYLT1Q86Y38 959 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 RHOT2Q8IXI1 618 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 CMTR2Q8IYT2 770 aaKnown RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 HERVK_113Q902F9 699 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 C18orf8Q96DM3 657 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 VCPIP1Q96JH7 1222 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 SMOQ99835 787 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 LBHD1Q9BQE6 289 aaPredicted RBP19.55■□□□□ 0.72
CAPN3-209ENST00000466222 DUSP16Q9BY84 665 aa19.55■□□□□ 0.72
CAPN3-209ENST00000466222 SLC4A7Q9Y6M7 1214 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms