RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 BCDIN3DQ7Z5W3 292 aaKnown RBP2.84□□□□□ -1.95
CCDC93-205ENST00000466171 IZUMO1Q8IYV9 350 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 ABRAQ8N0Z2 381 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 ARFGAP1Q8N6T3 406 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 RSPRY1Q96DX4 576 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 SIGLEC11Q96RL6 698 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 MMS19Q96T76 1030 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 SLC13A1Q9BZW2 595 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 SPC25Q9HBM1 224 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 ZSCAN32Q9NX65 697 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 SPEF1Q9Y4P9 236 aa2.84□□□□□ -1.95
CCDC93-205ENST00000466171 ANKRD62A6NC57 917 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 B4DGG1 531 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 hCG_1984214I3L0E3 225 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 TLR2O60603 784 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 MT-CO3P00414 261 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 FGAP02671 866 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 PSG1P11464 419 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 HOXD9P28356 352 aaPredicted RBP2.83□□□□□ -1.96
CCDC93-205ENST00000466171 HTR6P50406 440 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 WNT3P56703 355 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 RPS13P62277 151 aaKnown RBP2.83□□□□□ -1.96
CCDC93-205ENST00000466171 MTMR1Q13613 665 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 CYP1B1Q16678 543 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 PGS1Q32NB8 556 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 LEXMQ3ZCV2 418 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 KHDC1LQ5JSQ8 128 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 DEF8Q6ZN54 512 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 USP45Q70EL2 814 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 MPLKIPQ8TAP9 179 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF398Q8TD17 642 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 SLC35A4Q96G79 324 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 CDK5RAP3Q96JB5 506 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 TRMOQ9BU70 441 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 FAM234AQ9H0X4 552 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 SNX15Q9NRS6 342 aa2.83□□□□□ -1.96
CCDC93-205ENST00000466171 MRPS17Q9Y2R5 130 aaKnown RBP2.83□□□□□ -1.96
CCDC93-205ENST00000466171 TTC3P53804 2025 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 EME2A4GXA9 379 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 ALG1L2C9J202 215 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 PRSS44E7EML9 344 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 M0R3H8 397 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 SNUPNO95149 360 aaKnown RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CSF1RP07333 972 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CYP19A1P11511 503 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 ADORA2AP29274 412 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CDC25AP30304 524 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 GKP32189 559 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CDKN2AP42771 156 aaKnown RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 RECQLP46063 649 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 DGKEP52429 567 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 SRSF1Q07955 248 aaKnown RBP eCLIP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 PLS1Q14651 629 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 ODF1Q14990 250 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 MLC1Q15049 377 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 VSTM1Q6UX27 236 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 DLK2Q6UY11 383 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 COLCA1Q6ZS62 124 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 ADHFE1Q8IWW8 467 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.82□□□□□ -1.965e-6■■□□□ 14.2
CCDC93-205ENST00000466171 PRR18Q8N4B5 295 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 NGDNQ8NEJ9 315 aaKnown RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 MAP4K1Q92918 833 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 ZFYVE19Q96K21 471 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 HS6ST2Q96MM7 605 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 PRR25Q96S07 402 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CCDC8Q9H0W5 538 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-205ENST00000466171 CXorf36Q9H7Y0 433 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 PCDHA6Q9UN73 950 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 PROCRQ9UNN8 238 aa2.82□□□□□ -1.96
CCDC93-205ENST00000466171 SMAD6O43541 496 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 PMPCBO75439 489 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 POU2F2P09086 479 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 PRKAR1BP31321 381 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 MTHFSP49914 203 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 COPB1P53618 953 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 UCP3P55916 312 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 NANOS2P60321 138 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 NKX6-1P78426 367 aaPredicted RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 LARS2Q15031 903 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 CC2D1BQ5T0F9 858 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 CERCAMQ5T4B2 595 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 RNF187Q5TA31 235 aaPredicted RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 LMBRD2Q68DH5 695 aaPredicted RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 DPY19L3Q6ZPD9 716 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 PTCHD4Q6ZW05 846 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 LIX1LQ8IVB5 337 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 SPARTQ8N0X7 666 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 PNISRQ8TF01 805 aaKnown RBP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 MESP1Q9BRJ9 268 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 TMEM184CQ9NVA4 438 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 ASIC5Q9NY37 505 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 HEY2Q9UBP5 337 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 USP22Q9UPT9 525 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 MED16Q9Y2X0 877 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 SNX14Q9Y5W7 946 aa2.81□□□□□ -1.96
CCDC93-205ENST00000466171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.81□□□□□ -1.96
CCDC93-205ENST00000466171 LACTBL1A8MY62 500 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 PPM1GO15355 546 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms