RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ERBB2P04626 1255 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CYP1A2P05177 515 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 URODP06132 367 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PLEKP08567 350 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 ACRP10323 421 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 NPR3P17342 541 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CHRNB2P17787 502 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 IBSPP21815 317 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 MMP8P22894 467 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 BMP8BP34820 402 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 GPD2P43304 727 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PLA2G4AP47712 749 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 RPL34P49207 117 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 TUFMP49411 452 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 GALCP54803 685 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 NAP1L1P55209 391 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 ETF1P62495 437 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 RPL10AP62906 217 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 DSG1Q02413 1049 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 GOLGA8FQ08AF8 430 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 GOLGA8DPQ0D2H9 430 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 MTA1Q13330 715 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CTXN3Q4LDR2 81 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 EFHC1Q5JVL4 640 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 FAM171A1Q5VUB5 890 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 SLC8B1Q6J4K2 584 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 C16orf59Q7L2K0 433 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 BEND5Q7L4P6 421 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM110Q86TL2 294 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 ACOT1Q86TX2 421 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 SPATA2LQ8IUW3 424 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 REXO1L1PQ8IX06 675 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 RNF168Q8IYW5 571 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 MCOLN2Q8IZK6 566 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 SLC39A11Q8N1S5 342 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 COLGALT1Q8NBJ5 622 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 C3orf20Q8ND61 904 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 C3orf58Q8NDZ4 430 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 KIF18AQ8NI77 898 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 LNX1Q8TBB1 728 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 FNIP1Q8TF40 1166 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PPP1R13BQ96KQ4 1090 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 C11orf84Q9BUA3 381 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 HERC2P3Q9BVR0 1158 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 SDCBP2Q9H190 292 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CSNK1G1Q9HCP0 422 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 NGRNQ9NPE2 291 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 MRPL17Q9NRX2 175 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CHST7Q9NS84 486 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 ASNSD1Q9NWL6 643 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 RRN3Q9NYV6 651 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 RNF14Q9UBS8 474 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 DNAJB4Q9UDY4 337 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 TSPAN16Q9UKR8 245 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PYCARDQ9ULZ3 195 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PRG3Q9Y2Y8 225 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 JRKLQ9Y4A0 524 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PCDHB5Q9Y5E4 795 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 IRAK3Q9Y616 596 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 BRCA2P51587 3418 aa6.34□□□□□ -1.4
CHMP3-206ENST00000466032 SCN1AP35498 2009 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 SCN5AQ14524 2016 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 A0A1W2PPC1 479 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 SIGLEC16A6NMB1 481 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MIF4GDA9UHW6 222 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF263O14978 683 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MICAL2O94851 1124 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 RTN3O95197 1032 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PRLRP16471 622 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 LMO2P25791 158 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 BMPR1AP36894 532 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 BRCC3P46736 316 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 RAP1GAPP47736 663 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PPP3CCP48454 512 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 GLUD2P49448 558 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 DEFB103AP81534 67 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CYP27A1Q02318 531 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 GPR17Q13304 367 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PLD1Q13393 1074 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PIGHQ14442 188 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MTF1Q14872 753 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 TCTN1Q2MV58 587 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 NAA35Q5VZE5 725 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 PLEKHA7Q6IQ23 1121 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 C11orf63Q6NUN7 778 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 CD300LGQ6UXG3 332 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 MON1BQ7L1V2 547 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ARHGAP18Q8N392 663 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 ACRBPQ8NEB7 543 aa6.33□□□□□ -1.4
CHMP3-206ENST00000466032 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
CHMP3-206ENST00000466032 HDAC7Q8WUI4 952 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms