RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ZSCAN31Q96LW9 406 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MTMR9Q96QG7 549 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 YIPF4Q9BSR8 244 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 TEKT3Q9BXF9 490 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 TMX1Q9H3N1 280 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 PRDM12Q9H4Q4 367 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 INVSQ9Y283 1065 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 RALGAPA2Q2PPJ7 1873 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 SMIM35A0A1B0GVV1 85 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 ENPP3O14638 875 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 TADA3O75528 432 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 SLITRK3O94933 977 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 PLATP00750 562 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 PFKMP08237 780 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 LINC00271P0C7V0 271 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 GNAT1P11488 350 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 XBP1P17861 261 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 FGFR4P22455 802 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 U2AF2P26368 475 aaKnown RBP eCLIP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 GATMP50440 423 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 SLC26A2P50443 739 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 JAK3P52333 1124 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CYP4A11Q02928 519 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 TAP1Q03518 808 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CTTNQ14247 550 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 IL17AQ16552 155 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 SLC10A6Q3KNW5 377 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 EMC4Q5J8M3 183 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF484Q5JVG2 852 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 STEAP3Q658P3 488 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CKAP2LQ8IYA6 745 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 METTL13Q8N6R0 699 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 USP38Q8NB14 1042 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 WASF1Q92558 559 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 ZSWIM3Q96MP5 696 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 LXNQ9BS40 222 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 IFIH1Q9BYX4 1025 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CELF4Q9BZC1 486 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 NGRNQ9NPE2 291 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 SMPD4Q9NXE4 827 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CLDND1Q9NY35 253 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 DTLQ9NZJ0 730 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 PADI3Q9ULW8 664 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 NOC2LQ9Y3T9 749 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 PCDHB6Q9Y5E3 794 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 NPFFR2Q9Y5X5 522 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 COL1A2P08123 1366 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 CUL9Q8IWT3 2517 aa5.36□□□□□ -1.55
EXOSC3-204ENST00000465860 BDP1A6H8Y1 2624 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MYH11P35749 1972 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TRIP11Q15643 1979 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 KDM3AQ9Y4C1 1321 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 IGKV6-21A0A0C4DH24 114 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 ABHD14A-ACY1A0A1B0GW23 586 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 LINC01553A4QN01 128 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PP2D1A8MPX8 630 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TBX3O15119 743 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 NEMFO60524 1076 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 LPXNO60711 386 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 EIF5BO60841 1220 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 CAND2O75155 1236 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MED24O75448 989 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 BAIAP3O94812 1187 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 GJB5O95377 273 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 ACTN1P12814 892 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 GCFC2P16383 781 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF28P17035 718 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 CDC25AP30304 524 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 SFNP31947 248 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 NLRP11P59045 1033 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PPP2R2AP63151 447 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 HMGN5P82970 282 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 HTRA4P83105 476 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 CUL4AQ13619 759 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 GNL2Q13823 731 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PUM1Q14671 1186 aaKnown RBP eCLIP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 EPHA7Q15375 998 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 CALCRLQ16602 461 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MTERF2Q49AM1 385 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 EFCAB12Q6NXP0 572 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TAF2Q6P1X5 1199 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM228AQ86W67 206 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MYOCDQ8IZQ8 938 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 LGI4Q8N135 537 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 PIGOQ8TEQ8 1089 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 LRRC15Q8TF66 581 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TOP1MTQ969P6 601 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TOE1Q96GM8 510 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM20AQ96MK3 541 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 HSD17B14Q9BPX1 270 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 EIF2AK1Q9BQI3 630 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 EPN3Q9H201 632 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 CDIP1Q9H305 208 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 FOXP1Q9H334 677 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 TTC12Q9H892 705 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 MINDY3Q9H8M7 445 aa5.35□□□□□ -1.55
EXOSC3-204ENST00000465860 POLD4Q9HCU8 107 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms