RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 BMP6P22004 513 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 GTF2H1P32780 548 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 RUNX3Q13761 415 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 KRT39Q6A163 491 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 Q6ZS52 159 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 UNC93AQ86WB7 457 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 ELOA2Q8IYF1 753 aaPredicted RBP23.12■■□□□ 1.29
LIME1-203ENST00000465591 NUP93Q8N1F7 819 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 SLC2A14Q8TDB8 520 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 SH3RF2Q8TEC5 729 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 NIF3L1Q9GZT8 377 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 RNF38Q9H0F5 515 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 ARHGAP26Q9UNA1 814 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 WNT6Q9Y6F9 365 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 MYO16Q9Y6X6 1858 aa23.11■■□□□ 1.29
LIME1-203ENST00000465591 MXI1P50539 228 aa23.11■■□□□ 1.29
LIME1-203ENST00000465591 NAIF1Q69YI7 327 aaPredicted RBP23.11■■□□□ 1.29
LIME1-203ENST00000465591 SMARCD1Q96GM5 515 aa23.11■■□□□ 1.29
LIME1-203ENST00000465591 IMPG2Q9BZV3 1241 aa23.11■■□□□ 1.29
LIME1-203ENST00000465591 DMAP1Q9NPF5 467 aaPredicted RBP23.11■■□□□ 1.29
LIME1-203ENST00000465591 MYOFQ9NZM1 2061 aa23.11■■□□□ 1.29
LIME1-203ENST00000465591 ATP8B3O60423 1300 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 WDR87Q6ZQQ6 2873 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 KINO60870 393 aaKnown RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 OLFM2O95897 454 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 OAS1P00973 400 aaKnown RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 TDGF1P13385 188 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CD58P19256 250 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 YWHAQP27348 245 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 ANP32AP39687 249 aaKnown RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 SLC5A3P53794 718 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 FKBP3Q00688 224 aaKnown RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 ZNF528Q3MIS6 628 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CBWD6Q4V339 395 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CBWD3Q5JTY5 395 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CBWD5Q5RIA9 395 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CC2D1AQ6P1N0 951 aaPredicted RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 C1orf228Q6PIY5 440 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 TSG101Q99816 390 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 CYP3A43Q9HB55 503 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 C2orf42Q9NWW7 574 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 IL37Q9NZH6 218 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 EHD2Q9NZN4 543 aa23.1■■□□□ 1.29
LIME1-203ENST00000465591 HOOK1Q9UJC3 728 aaKnown RBP23.1■■□□□ 1.29
LIME1-203ENST00000465591 CFAP54Q96N23 3096 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 SLC16A3O15427 465 aaKnown RBP23.09■■□□□ 1.29
LIME1-203ENST00000465591 CILPO75339 1184 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 ABL1P00519 1130 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 TCF3P15923 654 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 ADORA2BP29275 332 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 PGFP49763 221 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 CCINQ13939 588 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 PDGFRLQ15198 375 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 DCAF17Q5H9S7 520 aaPredicted RBP23.09■■□□□ 1.29
LIME1-203ENST00000465591 OSCP1Q8WVF1 389 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 NELL1Q92832 810 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 FBXO32Q969P5 355 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 SLITRK1Q96PX8 696 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 ARID3AQ99856 593 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 LINC00597Q9H2U6 94 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 CSNK1G1Q9HCP0 422 aa23.09■■□□□ 1.29
LIME1-203ENST00000465591 DUS2Q9NX74 493 aaKnown RBP23.09■■□□□ 1.29
LIME1-203ENST00000465591 CHORDC1Q9UHD1 332 aaPredicted RBP23.09■■□□□ 1.29
LIME1-203ENST00000465591 LEFTY2O00292 366 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 RTN3O95197 1032 aaPredicted RBP23.08■■□□□ 1.29
LIME1-203ENST00000465591 PFKLP17858 780 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 HOXC13P31276 330 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 PPP3CCP48454 512 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 MAP3K7CLP57077 242 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 SLC7A9P82251 487 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 SATB1Q01826 763 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 LRRC63Q05C16 580 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 EML3Q32P44 896 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 TCERG1LQ5VWI1 586 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 MAMSTRQ6ZN01 415 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 GPRIN1Q7Z2K8 1008 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 FBXL13Q8NEE6 735 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 TATDN2Q93075 761 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 DUSP9Q99956 384 aaKnown RBP23.08■■□□□ 1.29
LIME1-203ENST00000465591 NT5C1AQ9BXI3 368 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 FBRSL1Q9HCM7 1045 aaKnown RBP23.08■■□□□ 1.29
LIME1-203ENST00000465591 RAB20Q9NX57 234 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 SMPD4Q9NXE4 827 aa23.08■■□□□ 1.29
LIME1-203ENST00000465591 FAM92AA1XBS5 289 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 PPP1R3GB7ZBB8 358 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 BIN1O00499 593 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 SCAMP3O14828 347 aaKnown RBP23.07■■□□□ 1.28
LIME1-203ENST00000465591 MORC3Q14149 939 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 LRRC32Q14392 662 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 FSTL4Q6MZW2 842 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 DHTKD1Q96HY7 919 aaPredicted RBP23.07■■□□□ 1.28
LIME1-203ENST00000465591 HNRNPABQ99729 332 aaKnown RBP23.07■■□□□ 1.28
LIME1-203ENST00000465591 ECT2Q9H8V3 914 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 GMIPQ9P107 970 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 CPQQ9Y646 472 aa23.07■■□□□ 1.28
LIME1-203ENST00000465591 HHLA1C9JL84 531 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 PSMA7O14818 248 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 GJA4P35212 333 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 IFNAR2P48551 515 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 PDE6CP51160 858 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms