RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ARL14EPQ8N8R7 260 aaPredicted RBP12.33□□□□□ -0.44
CUX1-207ENST00000465461 TTC16Q8NEE8 873 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
CUX1-207ENST00000465461 MRPS31Q92665 395 aaKnown RBP12.33□□□□□ -0.44
CUX1-207ENST00000465461 SMARCD2Q92925 531 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 LRRC3BQ96PB8 259 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 GPR88Q9GZN0 384 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 DNAI2Q9GZS0 605 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 ZFP14Q9HCL3 533 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 GMIPQ9P107 970 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 UXTQ9UBK9 157 aaPredicted RBP12.33□□□□□ -0.44
CUX1-207ENST00000465461 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
CUX1-207ENST00000465461 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 LGALS16A8MUM7 142 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 CYP26A1O43174 497 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 TEX33O43247 280 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 PAEPP09466 180 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 UBXN1Q04323 297 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 SYCP1Q15431 976 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 VITQ6UXI7 678 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 PIGZQ86VD9 579 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 CMTM8Q8IZV2 173 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 RIN3Q8TB24 985 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 EDAQ92838 391 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 TTLL2Q9BWV7 592 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 RNF38Q9H0F5 515 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 FAM124BQ9H5Z6 455 aaPredicted RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 FAM207AQ9NSI2 230 aaPredicted RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 DENND4CQ5VZ89 1909 aa12.32□□□□□ -0.44
CUX1-207ENST00000465461 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
CUX1-207ENST00000465461 ANAPC1Q9H1A4 1944 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 M0QYV0 167 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 THAP12O43422 761 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 ECI2O75521 394 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
CUX1-207ENST00000465461 USP17L7P0C7H9 530 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 ALADP13716 330 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 UCHL3P15374 230 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 RGS7P49802 495 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 DRAP1Q14919 205 aaPredicted RBP12.31□□□□□ -0.44
CUX1-207ENST00000465461 CNGA2Q16280 664 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 LCLAT1Q6UWP7 414 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 ENOSF1Q7L5Y1 443 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 SHC3Q92529 594 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
CUX1-207ENST00000465461 ELSPBP1Q96BH3 223 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
CUX1-207ENST00000465461 GANQ9H2C0 597 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 NMUR1Q9HB89 426 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 NLRC4Q9NPP4 1024 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 C11orf16Q9NQ32 467 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 IL37Q9NZH6 218 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 KIAA1257Q9ULG3 409 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.31□□□□□ -0.44
CUX1-207ENST00000465461 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 COL4A3Q01955 1670 aa12.31□□□□□ -0.44
CUX1-207ENST00000465461 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 A0A1W2PQH9 124 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 SCAMP3O14828 347 aaKnown RBP12.3□□□□□ -0.44
CUX1-207ENST00000465461 GABBR2O75899 941 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 PDGFBP01127 241 aaPredicted RBP12.3□□□□□ -0.44
CUX1-207ENST00000465461 LCP1P13796 627 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 HDCP19113 662 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 GNA15P30679 374 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 CLCN1P35523 988 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 AVPR1AP37288 418 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 KIF11P52732 1056 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
CUX1-207ENST00000465461 ZXDBP98169 803 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 BST2Q10589 180 aaKnown RBP12.3□□□□□ -0.44
CUX1-207ENST00000465461 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 SLC47A2Q86VL8 602 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 TTC8Q8TAM2 541 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 TSPY26PQ9H489 355 aa12.3□□□□□ -0.44
CUX1-207ENST00000465461 CCSER2Q9H7U1 834 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms