RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SEPT11Q9NVA2 429 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 CYTH4Q9UIA0 394 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 SLC27A5Q9Y2P5 690 aa17.86■□□□□ 0.45
EXOSC3-203ENST00000465229 TULP2O00295 520 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 SEC24AO95486 1093 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 UNGP13051 313 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 NPR3P17342 541 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 MAGEA11P43364 429 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 BCAT1P54687 386 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 ITIH3Q06033 890 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 PTPROQ16827 1216 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 CLEC16AQ2KHT3 1053 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 TRIM72Q6ZMU5 477 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 ZNF572Q7Z3I7 529 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 ADGRD2Q7Z7M1 963 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 MSANTD4Q8NCY6 345 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 ZMIZ2Q8NF64 920 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 SLC35F5Q8WV83 523 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 KCNK16Q96T55 309 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 CSNK1G1Q9HCP0 422 aa17.85■□□□□ 0.45
EXOSC3-203ENST00000465229 PER2O15055 1255 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 CLASP2O75122 1294 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 LSM8O95777 96 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 SPATA31D3P0C874 917 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 HAPLN1P10915 354 aaPredicted RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 CLCN4P51793 760 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 MAP3K7CLP57077 242 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 NOMO3P69849 1222 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 BST2Q10589 180 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 VSTM1Q6UX27 236 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 SPATA31D4Q6ZUB0 917 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 RBM23Q86U06 439 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 TMEM35BQ8NCS4 154 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 C1orf131Q8NDD1 294 aaKnown RBP17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 CPA5Q8WXQ8 436 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 TAS2R14Q9NYV8 317 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 MAFFQ9ULX9 164 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 HYOU1Q9Y4L1 999 aa17.84■□□□□ 0.45
EXOSC3-203ENST00000465229 FAM170AA1A519 330 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 F8VP50 259 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 SOAT2O75908 522 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 H2AFZP0C0S5 128 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 SETSIPP0DME0 302 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 GRIK1P39086 918 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 PMF1Q6P1K2 205 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 H2AFVQ71UI9 128 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 TCEAL8Q8IYN2 117 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 TLE6Q9H808 572 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 CYP4F11Q9HBI6 524 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 DMAP1Q9NPF5 467 aaPredicted RBP17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 HSFX1Q9UBD0 423 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 RNF14Q9UBS8 474 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 CEP83Q9Y592 693 aa17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 PRRC2BQ5JSZ5 2229 aaKnown RBP17.83■□□□□ 0.45
EXOSC3-203ENST00000465229 XPO1O14980 1071 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 GLUD1P00367 558 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 C1RP00736 705 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 GZMAP12544 262 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 ELF1P32519 619 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 CLCN6P51797 869 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC8A3P57103 927 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 DDR2Q16832 855 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 MGAT5BQ3V5L5 792 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 ACAD10Q6JQN1 1059 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 PIGZQ86VD9 579 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 SCN4BQ8IWT1 228 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 STK32AQ8WU08 396 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC22A17Q8WUG5 538 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 SEPT5Q99719 369 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 UBXN6Q9BZV1 441 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 RAB21Q9UL25 225 aa17.83■□□□□ 0.44
EXOSC3-203ENST00000465229 TMCO5BA8MYB1 307 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 HHLA1C9JL84 531 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 GABBR2O75899 941 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 PLA2G4AP47712 749 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 TUFMP49411 452 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 GPR15P49685 360 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 RGS7P49802 495 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 CENPCQ03188 943 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 PDCLQ13371 301 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 BRD3Q15059 726 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 DNAAF5Q86Y56 855 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 KREMEN2Q8NCW0 462 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 CALR3Q96L12 384 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 C8orf48Q96LL4 319 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 TLR10Q9BXR5 811 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 PACSIN1Q9BY11 444 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 FBXW11Q9UKB1 542 aa17.82■□□□□ 0.44
EXOSC3-203ENST00000465229 CCDC151A5D8V7 595 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 PRRG1O14668 218 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 ATP8B1O43520 1251 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 BUB1O43683 1085 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 EPCAMP16422 314 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 NRIP1P48552 1158 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms