RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 BPIFB4P59827 614 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 TEAD2Q15562 447 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 SHKBP1Q8TBC3 707 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 TATDN2Q93075 761 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
CPSF4-209ENST00000465132 PGLYRP2Q96PD5 576 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 SPAG5Q96R06 1193 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 LRRC3Q9BY71 257 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 STK33Q9BYT3 514 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
CPSF4-209ENST00000465132 GPR88Q9GZN0 384 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 EPC1Q9H2F5 836 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 CHRDQ9H2X0 955 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 APOBEC3GQ9HC16 384 aaKnown RBP18.51■□□□□ 0.55
CPSF4-209ENST00000465132 CISHQ9NSE2 258 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 FAM207AQ9NSI2 230 aaPredicted RBP18.51■□□□□ 0.55
CPSF4-209ENST00000465132 DLL3Q9NYJ7 618 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 PIAS3Q9Y6X2 628 aa18.51■□□□□ 0.55
CPSF4-209ENST00000465132 ITIH6Q6UXX5 1313 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 WDR87Q6ZQQ6 2873 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 MED19A0JLT2 244 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-209ENST00000465132 UCHL3P15374 230 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 KCNMA1Q12791 1236 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 DUSP4Q13115 394 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 GPR17Q13304 367 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 PLD1Q13393 1074 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 FIGNQ5HY92 759 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 SPECC1LQ69YQ0 1117 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 MAMSTRQ6ZN01 415 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 C4orf50Q6ZRC1 276 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 MFSD6LQ8IWD5 586 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 FAM3CQ92520 227 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 FAM126AQ9BYI3 521 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-209ENST00000465132 CRISPLD1Q9H336 500 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 SMYD3Q9H7B4 428 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 DNAJC12Q9UKB3 198 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 SMG5Q9UPR3 1016 aaKnown RBP18.5■□□□□ 0.55
CPSF4-209ENST00000465132 SIK3Q9Y2K2 1263 aa18.5■□□□□ 0.55
CPSF4-209ENST00000465132 NCANO14594 1321 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 TSC2P49815 1807 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 HEPACAM2A8MVW5 462 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 GOLGA6L6A8MZA4 724 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 ZNF263O14978 683 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 PAEPP09466 180 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 TDGF1P13385 188 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 CD58P19256 250 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 STILQ15468 1287 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 RRAGAQ7L523 313 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 TMC8Q8IU68 726 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 KBTBD7Q8WVZ9 684 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 E2F7Q96AV8 911 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 MRFAP1L1Q96HT8 127 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 SYT15Q9BQS2 421 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 IER2Q9BTL4 223 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 SLITRK6Q9H5Y7 841 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 LMAN1LQ9HAT1 526 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.55
CPSF4-209ENST00000465132 HSFX1Q9UBD0 423 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 PCDHB4Q9Y5E5 795 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 COL4A2P08572 1712 aa18.49■□□□□ 0.55
CPSF4-209ENST00000465132 A0A1W2PRU2 124 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 ARNTLO00327 626 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 TEX33O43247 280 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 CILPO75339 1184 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 NDST1P52848 882 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 EPHB3P54753 998 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 SLC8A3P57103 927 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 POLR2FP61218 127 aaKnown RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 RSPO4Q2I0M5 234 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 TSR1Q2NL82 804 aaKnown RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 CRYBG2Q8N1P7 616 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 GPR161Q8N6U8 529 aaKnown RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 SECISBP2LQ93073 1101 aaKnown RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 RSPRY1Q96DX4 576 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 TMEM176AQ96HP8 235 aa18.48■□□□□ 0.55
CPSF4-209ENST00000465132 MRPL45Q9BRJ2 306 aaKnown RBP18.48■□□□□ 0.55
CPSF4-209ENST00000465132 F5P12259 2224 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 A0A1W2PQJ5 194 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 MED7O43513 233 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 PDGFRBP09619 1106 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 KRT5P13647 590 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 PTPN1P18031 435 aaKnown RBP18.47■□□□□ 0.55
CPSF4-209ENST00000465132 USP8P40818 1118 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 STAT1P42224 750 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ALDH1A3P47895 512 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 MLLT6P55198 1093 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-209ENST00000465132 CDH8P55286 799 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 PTK2Q05397 1052 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ARHGAP44Q17R89 818 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 INTS6LQ5JSJ4 861 aaKnown RBP18.47■□□□□ 0.55
CPSF4-209ENST00000465132 TMEM270Q6UE05 265 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ARHGEF19Q8IW93 802 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ATAD1Q8NBU5 361 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 SPPL2BQ8TCT7 592 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 FUBP3Q96I24 572 aaKnown RBP eCLIP18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ZCWPW1Q9H0M4 648 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
CPSF4-209ENST00000465132 SIX2Q9NPC8 291 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms