RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 EME1Q96AY2 570 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 CYP4F12Q9HCS2 524 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 DONSONQ9NYP3 566 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 STRCQ7RTU9 1775 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 RBAK-RBAKDNI3L0D1 243 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 VWA5AO00534 786 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 XPO1O14980 1071 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 NCAM1P13591 858 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TPH1P17752 444 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TAC1P20366 129 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 RFC5P40937 340 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 SNRPFP62306 86 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 APPL2Q8NEU8 664 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 USP6NLQ92738 828 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TNIP3Q96KP6 325 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 SH3GL3Q99963 347 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 CCDC90BQ9GZT6 254 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 PCDH9Q9HC56 1237 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 A1CFQ9NQ94 594 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 FBXO6Q9NRD1 293 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 EME2A4GXA9 379 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 ZFXP17010 805 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 FECHP22830 423 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 PTGER2P43116 358 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 C1QBPQ07021 282 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 ITGA9Q13797 1035 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 MYBPC2Q14324 1141 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 DNAL1Q4LDG9 190 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TDRD10Q5VZ19 366 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 POLNQ7Z5Q5 900 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 SLC26A11Q86WA9 606 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 AFG1LQ8WV93 481 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 SRPK1Q96SB4 655 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 DCLRE1BQ9H816 532 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 DDIT4Q9NX09 232 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 PCYOX1Q9UHG3 505 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TIMM13Q9Y5L4 95 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 XIRP1Q702N8 1843 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 O00370 1275 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
HPS4-208ENST00000464362 AVILO75366 819 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 POLBP06746 335 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 CYP3A4P08684 503 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 GHRP10912 638 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TGM2P21980 687 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 RBL1P28749 1068 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 PTPN4P29074 926 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 NME5P56597 212 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 IRX1P78414 480 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 LAMTOR4Q0VGL1 99 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 FASTKD3Q14CZ7 662 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 DENND1BQ6P3S1 775 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 IYDQ6PHW0 289 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 IZUMO2Q6UXV1 221 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 BBS5Q8N3I7 341 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 TBC1D10AQ9BXI6 508 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 PRMT7Q9NVM4 692 aaPredicted RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 DPP3Q9NY33 737 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 SUN2Q9UH99 717 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 C3orf70A6NLC5 250 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 C19orf81C9J6K1 198 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 GSTA4O15217 222 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 GFAPP14136 432 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ACAT1P24752 427 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 GNL1P36915 607 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 NDST1P52848 882 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 COPAP53621 1224 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 MRPS35P82673 323 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 MCL1Q07820 350 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 KPNB1Q14974 876 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 ANO4Q32M45 955 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 TCHHL1Q5QJ38 904 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 SCUBE1Q8IWY4 988 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 OR6J1Q8NGC5 347 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ASAP3Q8TDY4 903 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 CHST12Q9NRB3 414 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 SHOC2Q9UQ13 582 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 ASTN2O75129 1339 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 SPRP35270 261 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 PTK6Q13882 451 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 ASTE1Q2TB18 679 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 GJC2Q5T442 439 aaPredicted RBP9.41□□□□□ -0.9
HPS4-208ENST00000464362 STYK1Q6J9G0 422 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 KIAA1841Q6NSI8 718 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 MPZL3Q6UWV2 235 aa9.41□□□□□ -0.9
HPS4-208ENST00000464362 RFWD2Q8NHY2 731 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms