RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ATG4AQ8WYN0 398 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 ART4Q93070 314 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 CASD1Q96PB1 797 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 DCLK3Q9C098 648 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 CENPHQ9H3R5 247 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 DPEP3Q9H4B8 488 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.03
COL5A1-205ENST00000464187 USTQ9Y2C2 406 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 CEP83Q9Y592 693 aa15.27■□□□□ 0.03
COL5A1-205ENST00000464187 HOXA2O43364 376 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 CALB1P05937 261 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 FAM163BP0C2L3 166 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 RALAP11233 206 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 CSF2RAP15509 400 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 WARSP23381 471 aaKnown RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 CDH5P33151 784 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 GATMP50440 423 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 RPL7AP62424 266 aaKnown RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 KRT17Q04695 432 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 ZNF252P-AS1Q0IIN9 211 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 PPP1R7Q15435 360 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 CNGA2Q16280 664 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 DCLRE1AQ6PJP8 1040 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 CD300LGQ6UXG3 332 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 NPAS4Q8IUM7 802 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 COLGALT2Q8IYK4 626 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 WDTC1Q8N5D0 677 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 FAM193BQ96PV7 902 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
COL5A1-205ENST00000464187 MTRF1LQ9UGC7 380 aaKnown RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 R3HDM2Q9Y2K5 976 aaKnown RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 TIMM13Q9Y5L4 95 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-205ENST00000464187 TMEM191CA6NGB0 347 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 F8W810 466 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 GABRDO14764 452 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 MICAL2O94851 1124 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 ITGB1P05556 798 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 NUDT17P0C025 328 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 GJC1P36383 396 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 BRCC3P46736 316 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 EIF3BP55884 814 aaKnown RBP15.25■□□□□ 0.03
COL5A1-205ENST00000464187 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-205ENST00000464187 MFSD5Q6N075 450 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 OSTM1Q86WC4 334 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-205ENST00000464187 PABPC3Q9H361 631 aaKnown RBP15.25■□□□□ 0.03
COL5A1-205ENST00000464187 FAM49BQ9NUQ9 324 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 TSPAN16Q9UKR8 245 aa15.25■□□□□ 0.03
COL5A1-205ENST00000464187 A6NNZ2 444 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 I3L4J1 428 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 SHBGP04278 402 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 OR1G1P47890 313 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 KRT71Q3SY84 523 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TUBB8Q3ZCM7 444 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
COL5A1-205ENST00000464187 DNAJC24Q6P3W2 148 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 LCLAT1Q6UWP7 414 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 ANKS1BQ7Z6G8 1248 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TMEM86AQ8N2M4 240 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 MCEEQ96PE7 176 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 HEMGNQ9BXL5 484 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 FAM129AQ9BZQ8 928 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TTC3P53804 2025 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 M0QYV0 167 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TP73O15350 636 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 UPP2O95045 317 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TCF4P15884 667 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 PAX3P23760 479 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 HPDP32754 393 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-205ENST00000464187 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
COL5A1-205ENST00000464187 LHX1P48742 406 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 GUCY1A3Q02108 690 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 OGDHQ02218 1023 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 IFFO1Q0D2I5 559 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 PTK6Q13882 451 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 STILQ15468 1287 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 DENND2CQ68D51 928 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TMEM199Q8N511 208 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 RSPH1Q8WYR4 309 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 LPIN3Q9BQK8 851 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 OSBPL8Q9BZF1 889 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 NRDE2Q9H7Z3 1164 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
COL5A1-205ENST00000464187 WHRNQ9P202 907 aa15.24■□□□□ 0.03
COL5A1-205ENST00000464187 PRG3Q9Y2Y8 225 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-205ENST00000464187 TDRD15B5MCY1 1934 aaKnown RBP15.23■□□□□ 0.03
COL5A1-205ENST00000464187 ABHD14A-ACY1A0A1B0GW23 586 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 TBKBP1A7MCY6 615 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms