RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZNF254O75437 659 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 KATNA1O75449 491 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TAF5LO75529 589 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PRLP01236 227 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC159P0C7I6 412 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 UQCRBP14927 111 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 BRAFP15056 766 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CRABP2P29373 138 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PMLP29590 882 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SLC1A1P43005 524 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SLC1A4P43007 532 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 IREB2P48200 963 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SIK1P57059 783 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PRKCEQ02156 737 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NHLH1Q02575 133 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 FOLH1Q04609 750 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ZBTB16Q05516 673 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 SPAG1Q07617 926 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PAK1Q13153 545 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 RASGRF1Q13972 1273 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PTPAQ15257 358 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 STILQ15468 1287 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 TRIP10Q15642 601 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 RGS21Q2M5E4 152 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 MDH1BQ5I0G3 518 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 C6orf163Q5TEZ5 329 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 C1orf146Q5VVC0 180 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 XKR5Q6UX68 686 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 DGLUCYQ7Z3D6 616 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC84Q86UT8 332 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ITIH5Q86UX2 942 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 MMAAQ8IVH4 418 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CHCHD4Q8N4Q1 142 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LZTR1Q8N653 840 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 LINC00116Q8NCU8 138 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PYDC1Q8WXC3 89 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NANOS1Q8WY41 292 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HERVK_113Q902F9 699 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PMM1Q92871 262 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ATP2A3Q93084 1043 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PGBD4Q96DM1 585 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PGM2Q96G03 612 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 FAM89AQ96GI7 184 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 WNK4Q96J92 1243 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PLEKHA8Q96JA3 519 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CLPTM1LQ96KA5 538 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC138Q96M89 665 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CTRCQ99895 268 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC77Q9BR77 488 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 BTBD10Q9BSF8 475 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ALG1Q9BT22 464 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 HAUS8Q9BT25 410 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 STMN4Q9H169 189 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 EHMT1Q9H9B1 1298 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NPHS2Q9NP85 383 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 POLMQ9NP87 494 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 FAM207AQ9NSI2 230 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 MAP3K20Q9NYL2 800 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 NKIRAS1Q9NYS0 192 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 ARPP21Q9UBL0 812 aaPredicted RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 GABBR1Q9UBS5 961 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 DNMT3LQ9UJW3 386 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PCDHGB4Q9UN71 923 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PA2G4Q9UQ80 394 aaKnown RBP3.76□□□□□ -1.81
COL8A1-205ENST00000463753 PCDHGB5Q9Y5G0 923 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 MYH13Q9UKX3 1938 aa3.76□□□□□ -1.81
COL8A1-205ENST00000463753 A0A088AWK7 358 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 KLF18A0A0U1RQI7 1052 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 KRBA1A5PL33 1030 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 SYCE1LA8MT33 242 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ENPP3O14638 875 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CIB2O75838 187 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PARNO95453 639 aaKnown RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C6orf222P0C671 652 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 BMP2P12643 396 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 GFAPP14136 432 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CPA3P15088 417 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF12P17014 697 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PON1P27169 355 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PEX2P28328 305 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 KRT20P35900 424 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 HADHAP40939 763 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 RAB15P59190 212 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGAP4P98171 946 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 EFTUD2Q15029 972 aaKnown RBP eCLIP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PPP2R5EQ16537 467 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C10orf62Q5T681 223 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PXDC1Q5TGL8 231 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 C1orf53Q5VUE5 145 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 UBE2UQ5VVX9 321 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 TMEM132EQ6IEE7 984 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PLEKHA7Q6IQ23 1121 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 CCDC62Q6P9F0 684 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 FBXL19Q6PCT2 694 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 AMIGO2Q86SJ2 522 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF410Q86VK4 478 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 LRRC6Q86X45 466 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PDSS2Q86YH6 399 aa3.75□□□□□ -1.81
COL8A1-205ENST00000463753 PASD1Q8IV76 773 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms