RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 HOXA6P31267 233 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ASPAP45381 313 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 GPR15P49685 360 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 CDH8P55286 799 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 CSTF1Q05048 431 aaKnown RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 CCDC40Q4G0X9 1142 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 DCAF17Q5H9S7 520 aaPredicted RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 SDHAF4Q5VUM1 108 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
COMMD3-205ENST00000463688 TAS1R2Q8TE23 839 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 ZNF518BQ9C0D4 1074 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 CSNK1G1Q9HCP0 422 aa14.24□□□□□ -0.13
COMMD3-205ENST00000463688 PTPRZ1P23471 2315 aaPredicted RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 TRDMT1O14717 391 aaKnown RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 FOXD2O60548 495 aaPredicted RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 CILPO75339 1184 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 ADH1CP00326 375 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 CCDC192P0DO97 292 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 CHRNB1P11230 501 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 CD72P21854 359 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 STILQ15468 1287 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 ANKRD40Q6AI12 368 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 ARL14EPQ8N8R7 260 aaPredicted RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 HEXIM2Q96MH2 286 aaKnown RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 MMRN2Q9H8L6 949 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 PRMT8Q9NR22 394 aaPredicted RBP14.23□□□□□ -0.13
COMMD3-205ENST00000463688 KRT82Q9NSB4 513 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 IL37Q9NZH6 218 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 GCNT4Q9P109 453 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 DACH1Q9UI36 760 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 COQ4Q9Y3A0 265 aa14.23□□□□□ -0.13
COMMD3-205ENST00000463688 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 CCDC163A0A0D9SF12 145 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 FAM92AA1XBS5 289 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 RALAP11233 206 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 SDHBP21912 280 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 SLC5A3P53794 718 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 USP4Q13107 963 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 ZNF77Q15935 545 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 KLHDC10Q6PID8 442 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 JAKMIP2Q96AA8 810 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 ACDQ96AP0 544 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 TMEM176AQ96HP8 235 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 FAM84AQ96KN4 292 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 P2RY13Q9BPV8 354 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 DPEP3Q9H4B8 488 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 GTSE1Q9NYZ3 720 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 HESX1Q9UBX0 185 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 SCML2Q9UQR0 700 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 SH3BP1Q9Y3L3 701 aa14.22□□□□□ -0.13
COMMD3-205ENST00000463688 TCHHQ07283 1943 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 OLFM2O95897 454 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 OAS1P00973 400 aaKnown RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 MBL2P11226 248 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 ATP5C1P36542 298 aaKnown RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 EIF2DP41214 584 aaKnown RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 MTAPQ13126 283 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 PAK1Q13153 545 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 TMEM196Q5HYL7 178 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 CT47A1Q5JQC4 288 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 POTEHQ6S545 545 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 SMYD4Q8IYR2 804 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 ZNF276Q8N554 614 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 NELFBQ8WX92 580 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 RSPRY1Q96DX4 576 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 DUSP16Q9BY84 665 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 EBF3Q9H4W6 596 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 CISHQ9NSE2 258 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 LSM7Q9UK45 103 aaKnown RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 MAN1B1Q9UKM7 699 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 ZNF510Q9Y2H8 683 aa14.21□□□□□ -0.13
COMMD3-205ENST00000463688 MTF2Q9Y483 593 aaPredicted RBP14.21□□□□□ -0.13
COMMD3-205ENST00000463688 ZFHX2Q9C0A1 2572 aaPredicted RBP14.21□□□□□ -0.14
COMMD3-205ENST00000463688 DOCK6Q96HP0 2047 aa14.21□□□□□ -0.14
COMMD3-205ENST00000463688 PRR23AA6NEV1 266 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 LEFTY2O00292 366 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 CLDN5O00501 218 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 TADA3O75528 432 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 CD58P19256 250 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 RAP1GAPP47736 663 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 MORC3Q14149 939 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 ENOSF1Q7L5Y1 443 aa14.2□□□□□ -0.14
COMMD3-205ENST00000463688 CAMKK1Q8N5S9 505 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms