RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CDO1Q16878 200 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 P3H1Q32P28 736 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 CYP4F22Q6NT55 531 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 TRMT10CQ7L0Y3 403 aaKnown RBP10.66□□□□□ -0.7
MSH5-211ENST00000463144 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 ANKRD52Q8NB46 1076 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 APPL2Q8NEU8 664 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 STK32AQ8WU08 396 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 TMEM109Q9BVC6 243 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 ADAM33Q9BZ11 813 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 SENP6Q9GZR1 1112 aaPredicted RBP10.66□□□□□ -0.7
MSH5-211ENST00000463144 MIS12Q9H081 205 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 MIOSQ9NXC5 875 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 HESX1Q9UBX0 185 aa10.66□□□□□ -0.7
MSH5-211ENST00000463144 DPYSL4O14531 572 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH5-211ENST00000463144 ATP2C2O75185 946 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 PECAM1P16284 738 aaPredicted RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 TKTP29401 623 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 CCND3P30281 292 aaPredicted RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 ATP11AP98196 1134 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 SV2CQ496J9 727 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 FAM47CQ5HY64 1035 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 EPS8L3Q8TE67 593 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 SNX25Q9H3E2 840 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 AGO3Q9H9G7 860 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 TLDC2A0PJX2 215 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 DNALI1O14645 258 aaPredicted RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 HUS1O60921 280 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 ASGR1P07306 291 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 RARBP10826 455 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 WARSP23381 471 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 MDH1P40925 334 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 GDF10P55107 478 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 BST2Q10589 180 aaKnown RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 KYNUQ16719 465 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 CCSAPQ6IQ19 270 aaPredicted RBP10.65□□□□□ -0.7
MSH5-211ENST00000463144 ADGRF2Q8IZF7 708 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 BBOF1Q8ND07 529 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 SLC2A14Q8TDB8 520 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 LPPQ93052 612 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH5-211ENST00000463144 NINJ2Q9NZG7 142 aa10.65□□□□□ -0.7
MSH5-211ENST00000463144 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 SMIM23A6NLE4 172 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 M0QZ92 97 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 ACSL3O95573 720 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 TTC4O95801 387 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 IL4RP24394 825 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 MLH1P40692 756 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 CDR1P51861 262 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 BCAT1P54687 386 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 CDH6P55285 790 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 IFI35P80217 286 aaPredicted RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 GPS1Q13098 491 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 DPYSL3Q14195 570 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 KCNA10Q16322 511 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 ZC3H12AQ5D1E8 599 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 TNFAIP8L3Q5GJ75 292 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 AGMOQ6ZNB7 445 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 PAQR9Q6ZVX9 377 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RFX6Q8HWS3 928 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 FAM172AQ8WUF8 416 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 PGM2Q96G03 612 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 GAD1Q99259 594 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 C11orf84Q9BUA3 381 aaPredicted RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 CALN1Q9BXU9 219 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RABEP2Q9H5N1 569 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 XPNPEP3Q9NQH7 507 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RNF186Q9NXI6 227 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 HTTP42858 3142 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 BRCA2P51587 3418 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 SGK1O00141 431 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 CYB561D2O14569 222 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 LCP1P13796 627 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 ELNP15502 786 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 ACAT1P24752 427 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 SLCO1A2P46721 670 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 HDAC4P56524 1084 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 PPP2R2AP63151 447 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 AUHQ13825 339 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 CA9Q16790 459 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RNASEH2BQ5TBB1 312 aaKnown RBP10.64□□□□□ -0.71
MSH5-211ENST00000463144 WSCD1Q658N2 575 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 NPNTQ6UXI9 565 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 B4GALNT4Q76KP1 1039 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 ZDHHC17Q8IUH5 632 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 RELL1Q8IUW5 271 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
MSH5-211ENST00000463144 FUKQ8N0W3 1084 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms