RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 GTF3C6Q969F1 213 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 SPACA7Q96KW9 195 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CAMK1GQ96NX5 476 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 CYP2S1Q96SQ9 504 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 MMTAG2Q9BU76 263 aaKnown RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 TIPINQ9BVW5 301 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 ABI2Q9NYB9 513 aaPredicted RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 CPSF3Q9UKF6 684 aaKnown RBP8.31□□□□□ -1.08
SMC3-202ENST00000462899 DSEQ9UL01 958 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 ARHGAP26Q9UNA1 814 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 RAXQ9Y2V3 346 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 MYLKQ15746 1914 aa8.31□□□□□ -1.08
SMC3-202ENST00000462899 NBPF19A0A087WUL8 3843 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 A0A087WV48 116 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 A0A0B4J269 797 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 C2orf78A6NCI8 922 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 OGTO15294 1046 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 SH3BP5O60239 455 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 JAK2O60674 1132 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 NFATC1O95644 943 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 OLFM2O95897 454 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 USP17L7P0C7H9 530 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 STRN3Q13033 797 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 PDIA5Q14554 519 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 TRIP6Q15654 476 aaKnown RBP8.3□□□□□ -1.08
SMC3-202ENST00000462899 KYAT1Q16773 422 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 ME3Q16798 604 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 HYIQ5T013 277 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 WSCD1Q658N2 575 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 LMBRD2Q68DH5 695 aaPredicted RBP8.3□□□□□ -1.08
SMC3-202ENST00000462899 SLCO6A1Q86UG4 719 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 SLC41A1Q8IVJ1 513 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 CD302Q8IX05 232 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 HDDC3Q8N4P3 179 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 HNRNPLLQ8WVV9 542 aaKnown RBP8.3□□□□□ -1.08
SMC3-202ENST00000462899 CRELD1Q96HD1 420 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 ABCB6Q9NP58 842 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 KIAA1522Q9P206 1035 aaPredicted RBP8.3□□□□□ -1.08
SMC3-202ENST00000462899 UXTQ9UBK9 157 aaPredicted RBP8.3□□□□□ -1.08
SMC3-202ENST00000462899 LRWD1Q9UFC0 647 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 HCN2Q9UL51 889 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 DERAQ9Y315 318 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 C2CD2Q9Y426 696 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 PCDHB5Q9Y5E4 795 aa8.3□□□□□ -1.08
SMC3-202ENST00000462899 COL5A1P20908 1838 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 TRAV19A0A0A6YYK7 116 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 IGHV1OR15-9A0A0B4J2B8 117 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 PP2D1A8MPX8 630 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CYB561D2O14569 222 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 AP5Z1O43299 807 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 ALDH1A2O94788 518 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 KLF8O95600 359 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 CFIP05156 583 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CKMP06732 381 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 RDXP35241 583 aaKnown RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 SLC6A11P48066 632 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 TAF6P49848 677 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 NR1H3Q13133 447 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 ZNF174Q15697 407 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 TAF12Q16514 161 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 IL17AQ16552 155 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 DDR2Q16832 855 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CCDC142Q17RM4 750 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CFAP221Q4G0U5 840 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 TOGARAM2Q6ZUX3 1019 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 TMPRSS7Q7RTY8 843 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 RABEPKQ7Z6M1 372 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 NAXDQ8IW45 347 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 DCP1BQ8IZD4 617 aaKnown RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 ADGRG2Q8IZP9 1017 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 ARL14EPQ8N8R7 260 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 PNPLA1Q8N8W4 532 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 NECAB1Q8N987 351 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 CXorf38Q8TB03 319 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 SNX29Q8TEQ0 813 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 LRIG1Q96JA1 1093 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 FIZ1Q96SL8 496 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 PI4K2AQ9BTU6 479 aa8.29□□□□□ -1.08
SMC3-202ENST00000462899 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 RPF1Q9H9Y2 349 aaKnown RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
SMC3-202ENST00000462899 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 A0A1W2PQD8 194 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 TCRBV21S2A2A0A5A6 115 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 LEFTY2O00292 366 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
SMC3-202ENST00000462899 KAT7O95251 611 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PRB1P04280 392 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 PFKLP17858 780 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 GABRG2P18507 467 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 CYP2F1P24903 491 aa8.28□□□□□ -1.08
SMC3-202ENST00000462899 SLC12A3P55017 1021 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms