RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ZNF395Q9H8N7 513 aaPredicted RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 JPH1Q9HDC5 661 aaPredicted RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 PCSK1NQ9UHG2 260 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 EFR3BQ9Y2G0 817 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 SIP14410 1827 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 H0YIN7 160 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 WEE2P0C1S8 567 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 CCND2P30279 289 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 ACTR2P61160 394 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 RBBP5Q15291 538 aaKnown RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 MFN1Q8IWA4 741 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 DEPTORQ8TB45 409 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 CAPN14A8MX76 684 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 A8MXQ7 604 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 DKC1O60832 514 aaKnown RBP eCLIP19.25■□□□□ 0.67
HPS3-204ENST00000462030 IL1BP01584 269 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 PIGRP01833 764 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 RBP3P10745 1247 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 RAP1GDS1P52306 607 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 TGFB2P61812 414 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 ZRSR2Q15696 482 aaKnown RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 FAM91A1Q658Y4 838 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 SLFN12LQ6IEE8 588 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 DENND1BQ6P3S1 775 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 RSBN1LQ6PCB5 846 aaPredicted RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 RBM15BQ8NDT2 890 aaKnown RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 MTMR12Q9C0I1 747 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 CYTH4Q9UIA0 394 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 POLIQ9UNA4 740 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 TEX264Q9Y6I9 313 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 TTLL13PA6NNM8 815 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 TRIM49D1C9J1S8 452 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 COPEO14579 308 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 LDHAP00338 332 aaKnown RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 KRT7P08729 469 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 UBTFL6P0CB48 400 aaPredicted RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 TSHRP16473 764 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 TAZQ16635 292 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 NPNTQ6UXI9 565 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 CCDC110Q8TBZ0 833 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 CFAP36Q96G28 342 aa19.25■□□□□ 0.67
HPS3-204ENST00000462030 PPARGC1AQ9UBK2 798 aaKnown RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 CTDP1Q9Y5B0 961 aaPredicted RBP19.25■□□□□ 0.67
HPS3-204ENST00000462030 CCDC195A0A1B0GUA6 201 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 MAGEA13PA6NCF6 341 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 KRT3P12035 628 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 CDH5P33151 784 aaPredicted RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 BST1Q10588 318 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 ABHD15Q6UXT9 468 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 CCNJLQ8IV13 435 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 ARID3BQ8IVW6 561 aaPredicted RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 ARHGAP24Q8N264 748 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 PANX3Q96QZ0 392 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 FRMD8P1Q9BZ68 369 aaPredicted RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 KLF11O14901 512 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 MAGEC1O60732 1142 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 EIF4BP23588 611 aaKnown RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 KDSRQ06136 332 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 STYK1Q6J9G0 422 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 RIPOR1Q6ZS17 1223 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 TMPRSS6Q8IU80 811 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 THNSL1Q8IYQ7 743 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 ZNF526Q8TF50 670 aaPredicted RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 HSPH1Q92598 858 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 DDX50Q9BQ39 737 aaKnown RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 ZNF518BQ9C0D4 1074 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 RNF146Q9NTX7 359 aa19.24■□□□□ 0.67
HPS3-204ENST00000462030 MARCOQ9UEW3 520 aaPredicted RBP19.24■□□□□ 0.67
HPS3-204ENST00000462030 APOC4-APOC2K7ER74 178 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 MCF2LO15068 1137 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 APOC2P02655 101 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 C1QAP02745 245 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 GSTA2P09210 222 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 KITP10721 976 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 HIRAP54198 1017 aaPredicted RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 POLE2P56282 527 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 HADHQ16836 314 aaKnown RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 CTAGE3PQ8IX95 158 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PPM1NQ8N819 430 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 KCTD6Q8NC69 237 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 LPAR1Q92633 364 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 NIF3L1Q9GZT8 377 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PORCNQ9H237 461 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 KCNK4Q9NYG8 393 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PLA2G4CQ9UP65 541 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PSME4Q14997 1843 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 CXorf49A8MYA2 514 aaPredicted RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 CYB561D2O14569 222 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 ANPEPP15144 967 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 ABCD1P33897 745 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 GCLCP48506 637 aaPredicted RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 MRPS5P82675 430 aaKnown RBP19.23■□□□□ 0.67
HPS3-204ENST00000462030 KCNJ11Q14654 390 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 NBPF20Q3BBV1 942 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 XKR3Q5GH77 459 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 SCUBE1Q8IWY4 988 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms